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1N8J
Biol. Unit 2
Info
Asym.Unit (623 KB)
Biol.Unit 1 (313 KB)
Biol.Unit 2 (314 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AHPC WITH ACTIVE SITE CYSTEINE MUTATED TO SERINE (C46S)
Authors
:
Z. A. Wood, L. B. Poole, P. A. Karplus
Date
:
20 Nov 02 (Deposition) - 29 Apr 03 (Release) - 09 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.17
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J (1x)
Biol. Unit 2: K,L,M,N,O,P,Q,R,S,T (1x)
Keywords
:
Ahpc, Peroxiredoxin, Decamer, Antioxidant, Peroxidase, Alkylhydroperoxide Reductase, Ahpf, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. A. Wood, L. B. Poole, P. A. Karplus
Peroxiredoxin Evolution And The Regulation Of Hydrogen Peroxide Signaling
Science V. 300 650 2003
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 10)
Info
All PROSITE Patterns/Profiles
1: THIOREDOXIN_2 (K:1-156,L:1-156,M:1-156,N:1-156,O:...)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOREDOXIN_2
PS51352
Thioredoxin domain profile.
AHPC_SALTY
2-157
10
-
-
-
-
-
-
-
-
-
-
K:1-156
L:1-156
M:1-156
N:1-156
O:1-156
P:1-156
Q:1-156
R:1-156
S:1-156
T:1-156
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 20)
Info
All SCOP Domains
1a: SCOP_d1n8ja_ (A:)
1b: SCOP_d1n8jb_ (B:)
1c: SCOP_d1n8jk_ (K:)
1d: SCOP_d1n8jl_ (L:)
1e: SCOP_d1n8jm_ (M:)
1f: SCOP_d1n8jn_ (N:)
1g: SCOP_d1n8jo_ (O:)
1h: SCOP_d1n8jp_ (P:)
1i: SCOP_d1n8jq_ (Q:)
1j: SCOP_d1n8jr_ (R:)
1k: SCOP_d1n8js_ (S:)
1l: SCOP_d1n8jt_ (T:)
1m: SCOP_d1n8jc_ (C:)
1n: SCOP_d1n8jd_ (D:)
1o: SCOP_d1n8je_ (E:)
1p: SCOP_d1n8jf_ (F:)
1q: SCOP_d1n8jg_ (G:)
1r: SCOP_d1n8jh_ (H:)
1s: SCOP_d1n8ji_ (I:)
1t: SCOP_d1n8jj_ (J:)
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Classes
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)
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Folds
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)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione peroxidase-like
(136)
Protein domain
:
Alkyl hydroperoxide reductase AhpC
(9)
Salmonella typhimurium [TaxId: 90371]
(5)
1a
d1n8ja_
A:
1b
d1n8jb_
B:
1c
d1n8jk_
K:
1d
d1n8jl_
L:
1e
d1n8jm_
M:
1f
d1n8jn_
N:
1g
d1n8jo_
O:
1h
d1n8jp_
P:
1i
d1n8jq_
Q:
1j
d1n8jr_
R:
1k
d1n8js_
S:
1l
d1n8jt_
T:
1m
d1n8jc_
C:
1n
d1n8jd_
D:
1o
d1n8je_
E:
1p
d1n8jf_
F:
1q
d1n8jg_
G:
1r
d1n8jh_
H:
1s
d1n8ji_
I:
1t
d1n8jj_
J:
[
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CATH Domains
(1, 20)
Info
all CATH domains
1a: CATH_1n8jA00 (A:1-186)
1b: CATH_1n8jB00 (B:1-186)
1c: CATH_1n8jC00 (C:1-186)
1d: CATH_1n8jD00 (D:1-186)
1e: CATH_1n8jE00 (E:1-186)
1f: CATH_1n8jF00 (F:1-186)
1g: CATH_1n8jG00 (G:1-186)
1h: CATH_1n8jH00 (H:1-186)
1i: CATH_1n8jI00 (I:1-186)
1j: CATH_1n8jJ00 (J:1-186)
1k: CATH_1n8jK00 (K:1-186)
1l: CATH_1n8jL00 (L:1-186)
1m: CATH_1n8jM00 (M:1-186)
1n: CATH_1n8jN00 (N:1-186)
1o: CATH_1n8jO00 (O:1-186)
1p: CATH_1n8jP00 (P:1-186)
1q: CATH_1n8jQ00 (Q:1-186)
1r: CATH_1n8jR00 (R:1-186)
1s: CATH_1n8jS00 (S:1-186)
1t: CATH_1n8jT00 (T:1-186)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
Salmonella typhimurium. Organism_taxid: 602.
(6)
1a
1n8jA00
A:1-186
1b
1n8jB00
B:1-186
1c
1n8jC00
C:1-186
1d
1n8jD00
D:1-186
1e
1n8jE00
E:1-186
1f
1n8jF00
F:1-186
1g
1n8jG00
G:1-186
1h
1n8jH00
H:1-186
1i
1n8jI00
I:1-186
1j
1n8jJ00
J:1-186
1k
1n8jK00
K:1-186
1l
1n8jL00
L:1-186
1m
1n8jM00
M:1-186
1n
1n8jN00
N:1-186
1o
1n8jO00
O:1-186
1p
1n8jP00
P:1-186
1q
1n8jQ00
Q:1-186
1r
1n8jR00
R:1-186
1s
1n8jS00
S:1-186
1t
1n8jT00
T:1-186
[
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Pfam Domains
(2, 40)
Info
all PFAM domains
1a: PFAM_AhpC_TSA_1n8jT01 (T:3-133)
1b: PFAM_AhpC_TSA_1n8jT02 (T:3-133)
1c: PFAM_AhpC_TSA_1n8jT03 (T:3-133)
1d: PFAM_AhpC_TSA_1n8jT04 (T:3-133)
1e: PFAM_AhpC_TSA_1n8jT05 (T:3-133)
1f: PFAM_AhpC_TSA_1n8jT06 (T:3-133)
1g: PFAM_AhpC_TSA_1n8jT07 (T:3-133)
1h: PFAM_AhpC_TSA_1n8jT08 (T:3-133)
1i: PFAM_AhpC_TSA_1n8jT09 (T:3-133)
1j: PFAM_AhpC_TSA_1n8jT10 (T:3-133)
1k: PFAM_AhpC_TSA_1n8jT11 (T:3-133)
1l: PFAM_AhpC_TSA_1n8jT12 (T:3-133)
1m: PFAM_AhpC_TSA_1n8jT13 (T:3-133)
1n: PFAM_AhpC_TSA_1n8jT14 (T:3-133)
1o: PFAM_AhpC_TSA_1n8jT15 (T:3-133)
1p: PFAM_AhpC_TSA_1n8jT16 (T:3-133)
1q: PFAM_AhpC_TSA_1n8jT17 (T:3-133)
1r: PFAM_AhpC_TSA_1n8jT18 (T:3-133)
1s: PFAM_AhpC_TSA_1n8jT19 (T:3-133)
1t: PFAM_AhpC_TSA_1n8jT20 (T:3-133)
2a: PFAM_1_cysPrx_C_1n8jT21 (T:153-185)
2b: PFAM_1_cysPrx_C_1n8jT22 (T:153-185)
2c: PFAM_1_cysPrx_C_1n8jT23 (T:153-185)
2d: PFAM_1_cysPrx_C_1n8jT24 (T:153-185)
2e: PFAM_1_cysPrx_C_1n8jT25 (T:153-185)
2f: PFAM_1_cysPrx_C_1n8jT26 (T:153-185)
2g: PFAM_1_cysPrx_C_1n8jT27 (T:153-185)
2h: PFAM_1_cysPrx_C_1n8jT28 (T:153-185)
2i: PFAM_1_cysPrx_C_1n8jT29 (T:153-185)
2j: PFAM_1_cysPrx_C_1n8jT30 (T:153-185)
2k: PFAM_1_cysPrx_C_1n8jT31 (T:153-185)
2l: PFAM_1_cysPrx_C_1n8jT32 (T:153-185)
2m: PFAM_1_cysPrx_C_1n8jT33 (T:153-185)
2n: PFAM_1_cysPrx_C_1n8jT34 (T:153-185)
2o: PFAM_1_cysPrx_C_1n8jT35 (T:153-185)
2p: PFAM_1_cysPrx_C_1n8jT36 (T:153-185)
2q: PFAM_1_cysPrx_C_1n8jT37 (T:153-185)
2r: PFAM_1_cysPrx_C_1n8jT38 (T:153-185)
2s: PFAM_1_cysPrx_C_1n8jT39 (T:153-185)
2t: PFAM_1_cysPrx_C_1n8jT40 (T:153-185)
View:
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Thioredoxin
(367)
Family
:
AhpC-TSA
(28)
Salmonella typhimurium
(5)
1a
AhpC-TSA-1n8jT01
T:3-133
1b
AhpC-TSA-1n8jT02
T:3-133
1c
AhpC-TSA-1n8jT03
T:3-133
1d
AhpC-TSA-1n8jT04
T:3-133
1e
AhpC-TSA-1n8jT05
T:3-133
1f
AhpC-TSA-1n8jT06
T:3-133
1g
AhpC-TSA-1n8jT07
T:3-133
1h
AhpC-TSA-1n8jT08
T:3-133
1i
AhpC-TSA-1n8jT09
T:3-133
1j
AhpC-TSA-1n8jT10
T:3-133
1k
AhpC-TSA-1n8jT11
T:3-133
1l
AhpC-TSA-1n8jT12
T:3-133
1m
AhpC-TSA-1n8jT13
T:3-133
1n
AhpC-TSA-1n8jT14
T:3-133
1o
AhpC-TSA-1n8jT15
T:3-133
1p
AhpC-TSA-1n8jT16
T:3-133
1q
AhpC-TSA-1n8jT17
T:3-133
1r
AhpC-TSA-1n8jT18
T:3-133
1s
AhpC-TSA-1n8jT19
T:3-133
1t
AhpC-TSA-1n8jT20
T:3-133
Clan
:
no clan defined [family: 1-cysPrx_C]
(19)
Family
:
1-cysPrx_C
(19)
Salmonella typhimurium
(5)
2a
1-cysPrx_C-1n8jT21
T:153-185
2b
1-cysPrx_C-1n8jT22
T:153-185
2c
1-cysPrx_C-1n8jT23
T:153-185
2d
1-cysPrx_C-1n8jT24
T:153-185
2e
1-cysPrx_C-1n8jT25
T:153-185
2f
1-cysPrx_C-1n8jT26
T:153-185
2g
1-cysPrx_C-1n8jT27
T:153-185
2h
1-cysPrx_C-1n8jT28
T:153-185
2i
1-cysPrx_C-1n8jT29
T:153-185
2j
1-cysPrx_C-1n8jT30
T:153-185
2k
1-cysPrx_C-1n8jT31
T:153-185
2l
1-cysPrx_C-1n8jT32
T:153-185
2m
1-cysPrx_C-1n8jT33
T:153-185
2n
1-cysPrx_C-1n8jT34
T:153-185
2o
1-cysPrx_C-1n8jT35
T:153-185
2p
1-cysPrx_C-1n8jT36
T:153-185
2q
1-cysPrx_C-1n8jT37
T:153-185
2r
1-cysPrx_C-1n8jT38
T:153-185
2s
1-cysPrx_C-1n8jT39
T:153-185
2t
1-cysPrx_C-1n8jT40
T:153-185
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