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1N6M
Biol. Unit 2
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Asym.Unit (128 KB)
Biol.Unit 1 (121 KB)
Biol.Unit 2 (239 KB)
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(1)
Title
:
ROTATION OF THE STALK/NECK AND ONE HEAD IN A NEW CRYSTAL STRUCTURE OF THE KINESIN MOTOR PROTEIN, NCD
Authors
:
M. Yun, C. E. Bronner, C. -G. Park, S. -S. Cha, H. -W. Park, S. A. Endow
Date
:
11 Nov 02 (Deposition) - 28 Oct 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Keywords
:
Ncd, Microtubule, Motor, Kinesin, Cell Cycle
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Yun, C. E. Bronner, C. -G. Park, S. -S. Cha, H. -W. Park, S. A. Endow
Rotation Of The Stalk/Neck And One Head In A New Crystal Structure Of The Kinesin Motor Protein, Ncd
Embo J. V. 22 1 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
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No.
Name
Count
Type
Full Name
1
ADP
4
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:441 , ADP A:998
BINDING SITE FOR RESIDUE MG A 996
2
AC2
SOFTWARE
THR B:441 , ADP B:999
BINDING SITE FOR RESIDUE MG B 997
3
AC3
SOFTWARE
ARG A:356 , PRO A:357 , GLN A:435 , THR A:436 , GLY A:437 , SER A:438 , GLY A:439 , LYS A:440 , THR A:441 , TYR A:442 , MG A:996
BINDING SITE FOR RESIDUE ADP A 998
4
AC4
SOFTWARE
ARG B:354 , ARG B:356 , PRO B:357 , LEU B:359 , GLY B:437 , SER B:438 , GLY B:439 , LYS B:440 , THR B:441 , TYR B:442 , MG B:997 , HOH B:6283
BINDING SITE FOR RESIDUE ADP B 999
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: KINESIN_MOTOR_2 (A:348-670,B:348-668)
2: KINESIN_MOTOR_1 (A:574-585,B:574-585)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KINESIN_MOTOR_2
PS50067
Kinesin motor domain profile.
NCD_DROME
348-670
4
A:348-670
B:348-668
2
KINESIN_MOTOR_1
PS00411
Kinesin motor domain signature.
NCD_DROME
574-585
4
A:574-585
B:574-585
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1n6ma_ (A:)
1b: SCOP_d1n6mb_ (B:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Motor proteins
(119)
Protein domain
:
Kinesin motor Ncd (non-claret disjunctional)
(9)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(4)
1a
d1n6ma_
A:
1b
d1n6mb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1n6mB00 (B:292-668)
1b: CATH_1n6mA00 (A:292-671)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Kinesin
(69)
Homologous Superfamily
:
Kinesin
(69)
Fruit fly (Drosophila melanogaster)
(5)
1a
1n6mB00
B:292-668
1b
1n6mA00
A:292-671
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Kinesin_1n6mB01 (B:354-668)
1b: PFAM_Kinesin_1n6mB02 (B:354-668)
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Clan
:
P-loop_NTPase
(1112)
Family
:
Kinesin
(42)
Drosophila melanogaster (Fruit fly)
(4)
1a
Kinesin-1n6mB01
B:354-668
1b
Kinesin-1n6mB02
B:354-668
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Asym.Unit (128 KB)
Header - Asym.Unit
Biol.Unit 1 (121 KB)
Header - Biol.Unit 1
Biol.Unit 2 (239 KB)
Header - Biol.Unit 2
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