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1N06
Asym. Unit
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Asym.Unit (60 KB)
Biol.Unit 1 (29 KB)
Biol.Unit 2 (29 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SCHIZOSACCHAROMYCES POMBE RIBOFLAVIN KINASE REVEALS A NOVEL ATP AND RIBOFLAVIN BINDING FOLD
Authors
:
S. Bauer, K. Kemter, A. Bacher, R. Huber, M. Fischer, S. Steinbacher
Date
:
11 Oct 02 (Deposition) - 25 Feb 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Kinase, Phosphoryl Transferases, Flavin Cofactors, Metal Binding
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Bauer, K. Kemter, A. Bacher, R. Huber, M. Fischer, S. Steinbacher
Crystal Structure Of Schizosaccharomyces Pombe Riboflavin Kinase Reveals A Novel Atp And Riboflavin Binding Fold
J. Mol. Biol. V. 326 1463 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
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No.
Name
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1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
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Sites
(2, 2)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Description
1
AC1
SOFTWARE
VAL A:30 , GLY A:33 , ARG A:36 , GLY A:37 , SER A:38 , LYS A:39 , PRO A:44 , THR A:45 , VAL A:97 , HIS A:98 , LEU A:99 , ASP A:106 , PHE A:107 , TYR A:108 , HOH A:205 , HOH A:211 , HOH A:233 , HOH A:235 , HOH A:242 , HOH A:289 , TYR B:88
BINDING SITE FOR RESIDUE ADP A 201
2
AC2
SOFTWARE
TYR A:88 , VAL B:30 , GLY B:35 , ARG B:36 , GLY B:37 , SER B:38 , LYS B:39 , PRO B:44 , THR B:45 , ALA B:46 , VAL B:97 , HIS B:98 , LEU B:99 , ARG B:102 , ASP B:106 , PHE B:107 , TYR B:108 , HOH B:310 , HOH B:319 , HOH B:337 , HOH B:339 , HOH B:343 , HOH B:346 , HOH B:366
BINDING SITE FOR RESIDUE ADP B 301
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1n06a_ (A:)
1b: SCOP_d1n06b_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Riboflavin kinase-like
(23)
Family
:
ATP-dependent riboflavin kinase-like
(14)
Protein domain
:
Riboflavin kinase
(8)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(4)
1a
d1n06a_
A:
1b
d1n06b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1n06A00 (A:9-162)
1b: CATH_1n06B00 (B:8-162)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Riboflavin kinase-like
(22)
Fission yeast (Schizosaccharomyces pombe)
(4)
1a
1n06A00
A:9-162
1b
1n06B00
B:8-162
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Flavokinase_1n06B01 (B:19-148)
1b: PFAM_Flavokinase_1n06B02 (B:19-148)
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Clan
:
no clan defined [family: Flavokinase]
(12)
Family
:
Flavokinase
(12)
Schizosaccharomyces pombe (strain ATCC 38366 / 972) (Fission yeast)
(3)
1a
Flavokinase-1n06B01
B:19-148
1b
Flavokinase-1n06B02
B:19-148
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Asym.Unit (60 KB)
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