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1MSG
Asym. Unit
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Asym.Unit (45 KB)
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(1)
Title
:
SOLUTION STRUCTURE OF GRO(SLASH)MELANOMA GROWTH STIMULATORY ACTIVITY DETERMINED BY 1H NMR SPECTROSCOPY
Authors
:
K. -S. Kim, I. Clark-Lewis, B. D. Sykes
Date
:
25 Jan 95 (Deposition) - 31 Mar 95 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B
Keywords
:
Cytokine (Chemotactic)
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. S. Kim, I. Clark-Lewis, B. D. Sykes
Solution Structure Of Gro/Melanoma Growth Stimulatory Activity Determined By 1H Nmr Spectroscopy.
J. Biol. Chem. V. 269 32909 1994
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: SMALL_CYTOKINES_CXC (A:9-53,B:9-53)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SMALL_CYTOKINES_CXC
PS00471
Small cytokines (intercrine/chemokine) C-x-C subfamily signature.
GROA_HUMAN
43-87
2
A:9-53
B:9-53
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Exons
(3, 6)
Info
All Exons
Exon 1.2 (A:1-41 | B:1-41)
Exon 1.3a (A:41-69 | B:41-69)
Exon 1.4 (A:69-72 | B:69-72)
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1: Boundary 1.1b/1.2
2: Boundary 1.2/1.3a
3: Boundary 1.3a/1.4
4: Boundary 1.4/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000395761
1b
ENSE00002031450
chr4:
74735121-74735287
167
GROA_HUMAN
1-34
34
0
-
-
1.2
ENST00000395761
2
ENSE00001746882
chr4:
74735386-74735509
124
GROA_HUMAN
34-75
42
2
A:1-41
B:1-41
41
41
1.3a
ENST00000395761
3a
ENSE00001077828
chr4:
74735623-74735706
84
GROA_HUMAN
75-103
29
2
A:41-69
B:41-69
29
29
1.4
ENST00000395761
4
ENSE00001785277
chr4:
74736238-74736959
722
GROA_HUMAN
103-107
5
2
A:69-72
B:69-72
4
4
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SCOP Domains
(1, 2)
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1a: SCOP_d1msga_ (A:)
1b: SCOP_d1msgb_ (B:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IL8-like
(118)
Superfamily
:
Interleukin 8-like chemokines
(117)
Family
:
Interleukin 8-like chemokines
(113)
Protein domain
:
Melanoma growth stimulating activity (MGSA)
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1msga_
A:
1b
d1msgb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1msgA00 (A:1-72)
1b: CATH_1msgB00 (B:1-72)
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Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.40, no name defined]
(161)
Human (Homo sapiens)
(86)
1a
1msgA00
A:1-72
1b
1msgB00
B:1-72
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Pfam Domains
(1, 2)
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all PFAM domains
1a: PFAM_IL8_1msgB01 (B:1-67)
1b: PFAM_IL8_1msgB02 (B:1-67)
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Clan
:
no clan defined [family: IL8]
(55)
Family
:
IL8
(55)
Homo sapiens (Human)
(49)
1a
IL8-1msgB01
B:1-67
1b
IL8-1msgB02
B:1-67
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