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1MRY
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Biol.Unit 1 (45 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AN INACTIVE AKT2 KINASE DOMAIN
Authors
:
X. Huang, M. Begley, K. A. Morgenstern, Y. Gu, P. Rose, H. Zhao, X. Zhu
Date
:
18 Sep 02 (Deposition) - 23 Sep 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Agc Serine Threonine Kinase, Akt Pkb Kinase Domain, Tumorigenesis, X-Ray Crystal Structure, Signal Transduction, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Huang, M. Begley, K. A. Morgenstern, Y. Gu, P. Rose, H. Zhao, X. Zhu
Crystal Structure Of An Inactive Akt2 Kinase Domain
Structure V. 11 21 2003
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_040356 (I188V, chain A, )
2: VAR_040357 (R208K, chain A, )
3: VAR_067310 (R274H, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_040356
I
188
V
AKT2_HUMAN
Polymorphism
55859611
A
I
188
V
2
UniProt
VAR_040357
R
208
K
AKT2_HUMAN
Polymorphism
35817154
A
R
208
K
3
UniProt
VAR_067310
R
274
H
AKT2_HUMAN
Disease (NIDDM)
---
A
R
274
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:158-189)
2: PROTEIN_KINASE_ST (A:271-283)
3: AGC_KINASE_CTER (A:410-440)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
AKT2_HUMAN
158-191
1
A:158-189
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
AKT2_HUMAN
271-283
1
A:271-283
3
AGC_KINASE_CTER
PS51285
AGC-kinase C-terminal domain profile.
AKT2_HUMAN
410-481
1
A:410-440
[
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]
Exons
(9, 9)
Info
All Exons
Exon 1.14h (A:146-147)
Exon 1.15a (A:148-189)
Exon 1.17a (A:202-213)
Exon 1.18b (A:214-236)
Exon 1.19a (A:237-277)
Exon 1.19e (A:278-320 (gaps))
Exon 1.19j (A:321-392)
Exon 1.20b (A:392-421)
Exon 1.21a (A:422-440)
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All Exon Boundaries
01: Boundary 1.13b/1.14h
02: Boundary 1.14h/1.15a
03: Boundary 1.15a/1.17a
04: Boundary 1.17a/1.18b
05: Boundary 1.18b/1.19a
06: Boundary 1.19a/1.19e
07: Boundary 1.19e/1.19j
08: Boundary 1.19j/1.20b
09: Boundary 1.20b/1.21a
10: Boundary 1.21a/1.23g
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000392038
1a
ENSE00001854668
chr19:
40791302-40791088
215
AKT2_HUMAN
-
0
0
-
-
1.11b
ENST00000392038
11b
ENSE00002200789
chr19:
40771258-40771129
130
AKT2_HUMAN
1-16
16
0
-
-
1.12c
ENST00000392038
12c
ENSE00000877681
chr19:
40762961-40762833
129
AKT2_HUMAN
16-59
44
0
-
-
1.13b
ENST00000392038
13b
ENSE00001651589
chr19:
40761176-40761065
112
AKT2_HUMAN
59-96
38
0
-
-
1.14h
ENST00000392038
14h
ENSE00000877679
chr19:
40748594-40748441
154
AKT2_HUMAN
96-147
52
1
A:146-147
2
1.15a
ENST00000392038
15a
ENSE00001637769
chr19:
40747976-40747845
132
AKT2_HUMAN
148-191
44
1
A:148-189
42
1.17a
ENST00000392038
17a
ENSE00000706497
chr19:
40746017-40745952
66
AKT2_HUMAN
192-213
22
1
A:202-213
12
1.18b
ENST00000392038
18b
ENSE00001776014
chr19:
40744880-40744812
69
AKT2_HUMAN
214-236
23
1
A:214-236
23
1.19a
ENST00000392038
19a
ENSE00000706492
chr19:
40743998-40743876
123
AKT2_HUMAN
237-277
41
1
A:237-277
41
1.19e
ENST00000392038
19e
ENSE00001745899
chr19:
40742292-40742164
129
AKT2_HUMAN
278-320
43
1
A:278-320 (gaps)
43
1.19j
ENST00000392038
19j
ENSE00001638888
chr19:
40742011-40741797
215
AKT2_HUMAN
321-392
72
1
A:321-392
72
1.20b
ENST00000392038
20b
ENSE00000706486
chr19:
40741257-40741170
88
AKT2_HUMAN
392-421
30
1
A:392-421
30
1.21a
ENST00000392038
21a
ENSE00000706484
chr19:
40741054-40740952
103
AKT2_HUMAN
422-456
35
1
A:422-440
19
1.23g
ENST00000392038
23g
ENSE00001510510
chr19:
40739858-40736224
3635
AKT2_HUMAN
456-481
26
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1mrya_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Pkb kinase (Akt-2)
(16)
Human (Homo sapiens) [TaxId: 9606]
(16)
1a
d1mrya_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1mryA02 (A:146-235,A:430-438)
2a: CATH_1mryA01 (A:236-429)
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
1mryA02
A:146-235,A:430-438
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
1mryA01
A:236-429
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Pkinase_1mryA01 (A:152-409)
2a: PFAM_Pkinase_C_1mryA02 (A:429-440)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-1mryA01
A:152-409
Clan
:
no clan defined [family: Pkinase_C]
(22)
Family
:
Pkinase_C
(22)
Homo sapiens (Human)
(21)
2a
Pkinase_C-1mryA02
A:429-440
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