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1MQF
Biol. Unit 1
Info
Asym.Unit (94 KB)
Biol.Unit 1 (346 KB)
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(1)
Title
:
COMPOUND I FROM PROTEUS MIRABILIS CATALASE
Authors
:
P. Andreoletti, A. Pernoud, G. Sainz, P. Gouet, H. M. Jouve
Date
:
16 Sep 02 (Deposition) - 02 Oct 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Alpha + Beta, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
P. Andreoletti, A. Pernoud, G. Sainz, P. Gouet, H. M. Jouve
Structural Studies Of Proteus Mirabilis Catalase In Its Ground State, Oxidized State And In Complex With Formic Acid.
Acta Crystallogr. , Sect. D V. 59 2163 2003
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Hetero Components
(4, 40)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4a: S-DIOXYMETHIONINE (OMTa)
3a: OXYGEN ATOM (Oa)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
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No.
Name
Count
Type
Full Name
1
GOL
4
Ligand/Ion
GLYCEROL
2
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
O
-1
Ligand/Ion
OXYGEN ATOM
4
OMT
4
Mod. Amino Acid
S-DIOXYMETHIONINE
5
SO4
28
Ligand/Ion
SULFATE ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:182 , HIS A:192 , ARG A:216 , HOH A:825
BINDING SITE FOR RESIDUE SO4 A 485
02
AC2
SOFTWARE
PHE A:419 , ARG A:423 , HOH A:844
BINDING SITE FOR RESIDUE SO4 A 486
03
AC3
SOFTWARE
SER A:430 , ARG A:436
BINDING SITE FOR RESIDUE SO4 A 487
04
AC4
SOFTWARE
ARG A:182 , ASN A:223
BINDING SITE FOR RESIDUE SO4 A 488
05
AC5
SOFTWARE
PRO A:283 , HIS A:284 , ALA A:285
BINDING SITE FOR RESIDUE SO4 A 489
06
AC6
SOFTWARE
ARG A:216 , GLN A:218
BINDING SITE FOR RESIDUE SO4 A 490
07
AC7
SOFTWARE
ARG A:45 , ARG A:342 , TYR A:343 , HOH A:657
BINDING SITE FOR RESIDUE SO4 A 491
08
AC8
SOFTWARE
OMT A:53 , HIS A:54 , PHE A:140 , HEM A:501
BINDING SITE FOR RESIDUE O A 500
09
AC9
SOFTWARE
ASP A:44 , ARG A:51 , OMT A:53 , HIS A:54 , ARG A:91 , VAL A:125 , GLY A:126 , ASN A:127 , PHE A:140 , GLY A:195 , SER A:196 , PHE A:313 , MET A:329 , ARG A:333 , SER A:336 , TYR A:337 , HIS A:341 , ARG A:344 , O A:500 , HOH A:503 , HOH A:644 , HOH A:647
BINDING SITE FOR RESIDUE HEM A 501
10
BC1
SOFTWARE
GLU A:38 , HIS A:42 , ARG A:342 , HIS A:349 , HOH A:684
BINDING SITE FOR RESIDUE GOL A 502
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: CATALASE_2 (A:43-59)
2: CATALASE_1 (A:333-341)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CATALASE_2
PS00438
Catalase proximal active site signature.
CATA_PROMI
43-59
4
A:43-59
2
CATALASE_1
PS00437
Catalase proximal heme-ligand signature.
CATA_PROMI
333-341
4
A:333-341
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1mqfa_ (A:)
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Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Heme-dependent catalase-like
(82)
Superfamily
:
Heme-dependent catalase-like
(82)
Family
:
Heme-dependent catalases
(80)
Protein domain
:
Catalase I
(32)
Proteus mirabilis [TaxId: 584]
(9)
1a
d1mqfa_
A:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (94 KB)
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