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1MFG
Asym. Unit
Info
Asym.Unit (44 KB)
Biol.Unit 1 (41 KB)
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(1)
Title
:
THE STRUCTURE OF ERBIN PDZ DOMAIN BOUND TO THE CARBOXY-TERMINAL TAIL OF THE ERBB2 RECEPTOR
Authors
:
G. Birrane, J. Chung, J. A. Ladias
Date
:
10 Aug 02 (Deposition) - 21 Jan 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.25
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Pdz Domain, Protein-Peptide Complex, Erb-B2, Erbin. , Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Birrane, J. Chung, J. A. Ladias
Novel Mode Of Ligand Recognition By The Erbin Pdz Domain
J. Biol. Chem. V. 278 1399 2003
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
View:
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Sorry, no Info available
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PDZ (A:1280-1369)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
ERBIN_HUMAN
1321-1410
1
A:1280-1369
[
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Exons
(5, 5)
Info
All Exons
Exon 1.30 (B:1247-1255)
Exon 2.26b (A:1277-1280)
Exon 2.27b (A:1281-1311)
Exon 2.27e (A:1312-1336)
Exon 2.28j (A:1337-1371)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.29/1.30
2: Boundary 1.30/-
3: Boundary 2.25a/2.26b
4: Boundary 2.26b/2.27b
5: Boundary 2.27b/2.27e
6: Boundary 2.27e/2.28j
7: Boundary 2.28j/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4
ENST00000269571
4
ENSE00001234770
chr17:
37856254-37856564
311
ERBB2_HUMAN
1-25
25
0
-
-
1.5
ENST00000269571
5
ENSE00001673952
chr17:
37863243-37863394
152
ERBB2_HUMAN
25-75
51
0
-
-
1.6
ENST00000269571
6
ENSE00000950603
chr17:
37864574-37864787
214
ERBB2_HUMAN
76-147
72
0
-
-
1.7
ENST00000269571
7
ENSE00001200960
chr17:
37865571-37865705
135
ERBB2_HUMAN
147-192
46
0
-
-
1.8
ENST00000269571
8
ENSE00001200956
chr17:
37866066-37866134
69
ERBB2_HUMAN
192-215
24
0
-
-
1.9
ENST00000269571
9
ENSE00001200949
chr17:
37866339-37866454
116
ERBB2_HUMAN
215-253
39
0
-
-
1.10
ENST00000269571
10
ENSE00000950607
chr17:
37866593-37866734
142
ERBB2_HUMAN
254-301
48
0
-
-
1.11
ENST00000269571
11
ENSE00001200943
chr17:
37868181-37868300
120
ERBB2_HUMAN
301-341
41
0
-
-
1.12
ENST00000269571
12
ENSE00001200937
chr17:
37868575-37868701
127
ERBB2_HUMAN
341-383
43
0
-
-
1.13
ENST00000269571
13
ENSE00001121108
chr17:
37871539-37871612
74
ERBB2_HUMAN
383-408
26
0
-
-
1.14
ENST00000269571
14
ENSE00001121103
chr17:
37871699-37871789
91
ERBB2_HUMAN
408-438
31
0
-
-
1.15
ENST00000269571
15
ENSE00001121098
chr17:
37871993-37872192
200
ERBB2_HUMAN
438-505
68
0
-
-
1.16
ENST00000269571
16
ENSE00001121093
chr17:
37872554-37872686
133
ERBB2_HUMAN
505-549
45
0
-
-
1.17
ENST00000269571
17
ENSE00001121088
chr17:
37872768-37872858
91
ERBB2_HUMAN
549-579
31
0
-
-
1.18
ENST00000269571
18
ENSE00000950615
chr17:
37873573-37873733
161
ERBB2_HUMAN
580-633
54
0
-
-
1.19
ENST00000269571
19
ENSE00001121079
chr17:
37876040-37876087
48
ERBB2_HUMAN
633-649
17
0
-
-
1.20
ENST00000269571
20
ENSE00001121070
chr17:
37879572-37879710
139
ERBB2_HUMAN
649-695
47
0
-
-
1.21
ENST00000269571
21
ENSE00000950618
chr17:
37879791-37879913
123
ERBB2_HUMAN
696-736
41
0
-
-
1.22
ENST00000269571
22
ENSE00000950619
chr17:
37880165-37880263
99
ERBB2_HUMAN
737-769
33
0
-
-
1.23
ENST00000269571
23
ENSE00000950620
chr17:
37880979-37881164
186
ERBB2_HUMAN
770-831
62
0
-
-
1.24
ENST00000269571
24
ENSE00000950621
chr17:
37881302-37881457
156
ERBB2_HUMAN
832-883
52
0
-
-
1.25
ENST00000269571
25
ENSE00001717073
chr17:
37881580-37881655
76
ERBB2_HUMAN
884-909
26
0
-
-
1.26
ENST00000269571
26
ENSE00000950623
chr17:
37881960-37882106
147
ERBB2_HUMAN
909-958
50
0
-
-
1.27
ENST00000269571
27
ENSE00000950624
chr17:
37882815-37882912
98
ERBB2_HUMAN
958-990
33
0
-
-
1.28
ENST00000269571
28
ENSE00000950625
chr17:
37883068-37883256
189
ERBB2_HUMAN
991-1053
63
0
-
-
1.29
ENST00000269571
29
ENSE00000950626
chr17:
37883548-37883800
253
ERBB2_HUMAN
1054-1138
85
0
-
-
1.30
ENST00000269571
30
ENSE00001384235
chr17:
37883942-37884915
974
ERBB2_HUMAN
1138-1255
118
1
B:1247-1255
9
2.1a
ENST00000284037
1a
ENSE00001850711
chr5:
65222303-65222634
332
ERBIN_HUMAN
-
0
0
-
-
2.3b
ENST00000284037
3b
ENSE00001147720
chr5:
65284463-65284510
48
ERBIN_HUMAN
-
0
0
-
-
2.4
ENST00000284037
4
ENSE00000912221
chr5:
65288538-65288735
198
ERBIN_HUMAN
1-63
63
0
-
-
2.5
ENST00000284037
5
ENSE00000912222
chr5:
65290575-65290692
118
ERBIN_HUMAN
64-103
40
0
-
-
2.6
ENST00000284037
6
ENSE00000912223
chr5:
65307877-65307955
79
ERBIN_HUMAN
103-129
27
0
-
-
2.7
ENST00000284037
7
ENSE00000837126
chr5:
65309377-65309466
90
ERBIN_HUMAN
129-159
31
0
-
-
2.8
ENST00000284037
8
ENSE00000837127
chr5:
65310497-65310553
57
ERBIN_HUMAN
159-178
20
0
-
-
2.9
ENST00000284037
9
ENSE00000912224
chr5:
65317150-65317213
64
ERBIN_HUMAN
178-199
22
0
-
-
2.10b
ENST00000284037
10b
ENSE00000912225
chr5:
65319118-65319192
75
ERBIN_HUMAN
200-224
25
0
-
-
2.11b
ENST00000284037
11b
ENSE00000912226
chr5:
65320134-65320278
145
ERBIN_HUMAN
225-273
49
0
-
-
2.12b
ENST00000284037
12b
ENSE00000912227
chr5:
65321308-65321380
73
ERBIN_HUMAN
273-297
25
0
-
-
2.13
ENST00000284037
13
ENSE00000912228
chr5:
65321676-65321805
130
ERBIN_HUMAN
297-340
44
0
-
-
2.14
ENST00000284037
14
ENSE00000912229
chr5:
65322130-65322245
116
ERBIN_HUMAN
341-379
39
0
-
-
2.15
ENST00000284037
15
ENSE00000912230
chr5:
65324102-65324171
70
ERBIN_HUMAN
379-402
24
0
-
-
2.16
ENST00000284037
16
ENSE00000912231
chr5:
65334211-65334310
100
ERBIN_HUMAN
403-436
34
0
-
-
2.17
ENST00000284037
17
ENSE00000912232
chr5:
65338905-65339026
122
ERBIN_HUMAN
436-476
41
0
-
-
2.18b
ENST00000284037
18b
ENSE00000912233
chr5:
65339965-65340138
174
ERBIN_HUMAN
477-534
58
0
-
-
2.19
ENST00000284037
19
ENSE00000912234
chr5:
65342181-65342366
186
ERBIN_HUMAN
535-596
62
0
-
-
2.20
ENST00000284037
20
ENSE00000749858
chr5:
65344495-65344609
115
ERBIN_HUMAN
597-635
39
0
-
-
2.21
ENST00000284037
21
ENSE00000912235
chr5:
65346611-65346794
184
ERBIN_HUMAN
635-696
62
0
-
-
2.22a
ENST00000284037
22a
ENSE00000837128
chr5:
65349234-65350779
1546
ERBIN_HUMAN
696-1211
516
0
-
-
2.25a
ENST00000284037
25a
ENSE00001082465
chr5:
65367997-65368119
123
ERBIN_HUMAN
1212-1252
41
0
-
-
2.26b
ENST00000284037
26b
ENSE00002155220
chr5:
65370852-65371058
207
ERBIN_HUMAN
1253-1321
69
1
A:1277-1280
4
2.27b
ENST00000284037
27b
ENSE00000837130
chr5:
65372144-65372236
93
ERBIN_HUMAN
1322-1352
31
1
A:1281-1311
31
2.27e
ENST00000284037
27e
ENSE00000837131
chr5:
65372703-65372777
75
ERBIN_HUMAN
1353-1377
25
1
A:1312-1336
25
2.28j
ENST00000284037
28j
ENSE00001896859
chr5:
65374251-65378377
4127
ERBIN_HUMAN
1378-1412
35
1
A:1337-1371
35
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1mfga_ (A:)
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Organisms
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(
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Class
:
All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
PDZ domain
(180)
Protein domain
:
Erbin
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1mfga_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1mfgA00 (A:1277-1371)
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Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
1mfgA00
A:1277-1371
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