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1MC2
Asym. Unit
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Asym.Unit (55 KB)
Biol.Unit 1 (51 KB)
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(1)
Title
:
MONOMERIC LYS-49 PHOSPHOLIPASE A2 HOMOLOGUE PURIFIED FROM AG
Authors
:
Q. Liu, Q. Q. Huang, R. G. Zhang, C. M. Weeks, C. Jelsch, M. K. Teng, L. W. Niu
Date
:
05 Aug 02 (Deposition) - 21 Aug 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
0.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Ys49-Phospholipase A2, Snake Venom, Agkistrodon Acutus, Toxin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Q. Liu, Q. Q. Huang, M. K. Teng, C. M. Weeks, C. Jelsch, R. G. Zhang, L. W. Niu
The Crystal Structure Of A Novel, Inactive, Lysine 49 Pla2 From Agkistrodon Acutus Venom: An Ultrahigh Resolution, Ab Initio Structure Determination
J. Biol. Chem. V. 278 41400 2003
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
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All Hetero Components
1a: ISOPROPYL ALCOHOL (IPAa)
1b: ISOPROPYL ALCOHOL (IPAb)
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No.
Name
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Type
Full Name
1
IPA
2
Ligand/Ion
ISOPROPYL ALCOHOL
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Sites
(2, 2)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO A:1017 , HOH A:2032 , HOH A:2104 , HOH A:2204
BINDING SITE FOR RESIDUE IPA A 1135
2
AC2
SOFTWARE
GLY A:1006 , VAL A:1018 , TYR A:1119 , HOH A:2075
BINDING SITE FOR RESIDUE IPA A 1136
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 2)
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1: PA2_HIS (A:1044-1051)
2: PA2_ASP (A:1095-1105)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PA2_HIS
PS00118
Phospholipase A2 histidine active site.
PA2H_DEIAC
59-66
1
A:1044-1051
2
PA2_ASP
PS00119
Phospholipase A2 aspartic acid active site.
PA2H_DEIAC
101-111
1
A:1095-1105
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1mc2a_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
Phospholipase A2, PLA2
(282)
Superfamily
:
Phospholipase A2, PLA2
(282)
Family
:
Vertebrate phospholipase A2
(271)
Protein domain
:
Snake phospholipase A2
(124)
Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]
(2)
1a
d1mc2a_
A:
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CATH Domains
(1, 1)
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1a: CATH_1mc2A00 (A:1001-1134)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Phospholipase A2
(241)
Homologous Superfamily
:
Phospholipase A2
(241)
Chinese moccasin (Deinagkistrodon acutus)
(3)
1a
1mc2A00
A:1001-1134
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