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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
1M61
Asym. Unit
Info
Asym.Unit (47 KB)
Biol.Unit 1 (43 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE APO SH2 DOMAINS OF ZAP-70
Authors
:
R. H. A. Folmer, S. Geschwindner, Y. Xue
Date
:
11 Jul 02 (Deposition) - 15 Jul 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Apo Form, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. H. A. Folmer, S. Geschwindner, Y. Xue
Crystal Structure And Nmr Studies Of The Apo Sh2 Domains Of Zap-70: Two Bikes Rather Than A Tandem
Biochemistry V. 41 14176 2002
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PO4
1
Ligand/Ion
PHOSPHATE ION
[
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]
Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:170 , ARG A:190 , ARG A:192 , ALA A:199
BINDING SITE FOR RESIDUE PO4 A 300
[
close Site info
]
SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041846 (R175L, chain A, )
2: VAR_041847 (P191L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041846
R
175
L
ZAP70_HUMAN
Polymorphism
55964305
A
R
175
L
2
UniProt
VAR_041847
P
191
L
ZAP70_HUMAN
Polymorphism
56403250
A
P
191
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: SH2 (A:10-102|A:163-254)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH2
PS50001
Src homology 2 (SH2) domain profile.
ZAP70_HUMAN
10-102
163-254
2
A:10-102
A:163-254
[
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Exons
(4, 4)
Info
All Exons
Exon 1.3 (A:1-134)
Exon 1.6 (A:135-188)
Exon 1.7b (A:188-234)
Exon 1.8 (A:235-256)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.2/1.3
2: Boundary 1.3/1.6
3: Boundary 1.6/1.7b
4: Boundary 1.7b/1.8
5: Boundary 1.8/1.9a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000264972
1a
ENSE00001915964
chr2:
98330023-98330137
115
ZAP70_HUMAN
-
0
0
-
-
1.2
ENST00000264972
2
ENSE00001346286
chr2:
98330379-98330457
79
ZAP70_HUMAN
-
0
0
-
-
1.3
ENST00000264972
3
ENSE00002151593
chr2:
98340479-98340901
423
ZAP70_HUMAN
1-134
134
1
A:1-134
134
1.6
ENST00000264972
6
ENSE00001726390
chr2:
98341555-98341715
161
ZAP70_HUMAN
135-188
54
1
A:135-188
54
1.7b
ENST00000264972
7b
ENSE00001702700
chr2:
98349346-98349484
139
ZAP70_HUMAN
188-234
47
1
A:188-234
47
1.8
ENST00000264972
8
ENSE00001779223
chr2:
98349588-98349675
88
ZAP70_HUMAN
235-264
30
1
A:235-256
22
1.9a
ENST00000264972
9a
ENSE00001597048
chr2:
98349760-98349806
47
ZAP70_HUMAN
264-279
16
0
-
-
1.9e
ENST00000264972
9e
ENSE00001789090
chr2:
98350007-98350058
52
ZAP70_HUMAN
280-297
18
0
-
-
1.9g
ENST00000264972
9g
ENSE00001695806
chr2:
98350983-98351175
193
ZAP70_HUMAN
297-361
65
0
-
-
1.9i
ENST00000264972
9i
ENSE00001072211
chr2:
98351713-98351919
207
ZAP70_HUMAN
361-430
70
0
-
-
1.10
ENST00000264972
10
ENSE00001038176
chr2:
98353936-98354128
193
ZAP70_HUMAN
430-494
65
0
-
-
1.11a
ENST00000264972
11a
ENSE00001506092
chr2:
98354220-98354360
141
ZAP70_HUMAN
495-541
47
0
-
-
1.11d
ENST00000264972
11d
ENSE00001038187
chr2:
98354458-98354570
113
ZAP70_HUMAN
542-579
38
0
-
-
1.12c
ENST00000264972
12c
ENSE00001267184
chr2:
98355838-98356323
486
ZAP70_HUMAN
579-619
41
0
-
-
[
close EXON info
]
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1m61a1 (A:1-132)
1b: SCOP_d1m61a2 (A:133-256)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
SH2-like
(260)
Superfamily
:
SH2 domain
(260)
Family
:
SH2 domain
(225)
Protein domain
:
Tyrosine-protein kinase zap-70
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1m61a1
A:1-132
1b
d1m61a2
A:133-256
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CATH Domains
(2, 3)
Info
all CATH domains
1a: CATH_1m61A03 (A:157-253)
1b: CATH_1m61A01 (A:9-112)
2a: CATH_1m61A02 (A:113-156)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
SHC Adaptor Protein
(206)
Homologous Superfamily
:
SHC Adaptor Protein
(206)
Human (Homo sapiens)
(147)
1a
1m61A03
A:157-253
1b
1m61A01
A:9-112
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Syk Kinase; Chain A, domain 2
(4)
Homologous Superfamily
:
Syk Kinase; Chain A, domain 2
(4)
Human (Homo sapiens)
(4)
2a
1m61A02
A:113-156
[
close CATH info
]
Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_SH2_1m61A01 (A:163-239)
1b: PFAM_SH2_1m61A02 (A:163-239)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: SH2]
(119)
Family
:
SH2
(119)
Homo sapiens (Human)
(79)
1a
SH2-1m61A01
A:163-239
1b
SH2-1m61A02
A:163-239
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Chain A
Asymmetric Unit 1
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