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1LYV
Asym. Unit
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Asym.Unit (108 KB)
Biol.Unit 1 (105 KB)
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(1)
Title
:
HIGH-RESOLUTION STRUCTURE OF THE CATALYTICALLY INACTIVE YERSINIA TYROSINE PHOSPHATASE C403A MUTANT IN COMPLEX WITH PHOSPHATE.
Authors
:
A. G. Evdokimov, D. S. Waugh, K. Routzahn, J. Tropea, S. Cherry
Date
:
08 Jun 02 (Deposition) - 03 Jul 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.36
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Toxin, Tyrosine Phosphatase, Yersinia, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. G. Evdokimov, D. S. Waugh, K. Routzahn, J. Tropea, S. Cherry
High-Resolution Structure Of The Catalytically Inactive Yersinia Tyrosine Phosphatase C403A Mutant In Complex With Phosphate.
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: PHOSPHATE ION (PO4a)
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No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
PO4
1
Ligand/Ion
PHOSPHATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:216 , ARG A:235 , ARG A:236 , GLN A:237
BINDING SITE FOR RESIDUE CL A 999
2
AC2
SOFTWARE
ASP A:356 , GLN A:357 , SER A:403 , ARG A:404 , ALA A:405 , GLY A:406 , VAL A:407 , GLY A:408 , ARG A:409 , GLN A:446 , HOH A:1004 , HOH A:1053
BINDING SITE FOR RESIDUE PO4 A 1000
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: TYR_PHOSPHATASE_PTP (A:186-451)
2: TYR_PHOSPHATASE_2 (A:366-451)
3: TYR_PHOSPHATASE_1 (A:401-411)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TYR_PHOSPHATASE_PTP
PS50055
PTP type protein phosphatase family profile.
YOPH_YEREN
186-451
1
A:186-451
2
TYR_PHOSPHATASE_2
PS50056
Tyrosine specific protein phosphatases family profile.
YOPH_YEREN
366-451
1
A:366-451
3
TYR_PHOSPHATASE_1
PS00383
Tyrosine specific protein phosphatases active site.
YOPH_YEREN
401-411
1
A:401-411
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1lyva_ (A:)
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)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
(Phosphotyrosine protein) phosphatases II
(296)
Superfamily
:
(Phosphotyrosine protein) phosphatases II
(296)
Family
:
Higher-molecular-weight phosphotyrosine protein phosphatases
(166)
Protein domain
:
Protein-tyrosine phosphatase YopH, catalytic domain
(18)
Yersinia enterocolitica [TaxId: 630]
(15)
1a
d1lyva_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1lyvA00 (A:186-468)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Protein-Tyrosine Phosphatase; Chain A
(262)
Homologous Superfamily
:
Protein tyrosine phosphatase superfamily
(228)
Yersinia enterocolitica. Organism_taxid: 630.
(7)
1a
1lyvA00
A:186-468
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_Y_phosphatase_1lyvA01 (A:223-459)
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Clan
:
Phosphatase
(121)
Family
:
Y_phosphatase
(93)
Yersinia enterocolitica
(6)
1a
Y_phosphatase-1lyvA01
A:223-459
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