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1LXU
Theor. Model
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Theoretical Model (49 KB)
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(1)
Title
:
THEORETICAL MODEL OF THE CATALYTIC DOMAIN OF CAMP-SPECIFIC 3',5'-CYCLIC PHOSPHODIESTERASE 4C
Authors
:
S. Ramadevi, S. Sunitatajne
Date
:
06 Jun 02 (Deposition) - 26 Jun 02 (Release) - 20 Nov 02 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Ramadevi, S. Sunitatajne
Theoretical Model Of The Catalytic Domain Of Camp-Specific 3', 5'-Cyclic Phosphodiesterase 4C
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_034374 (R39Q, chain A, )
2: VAR_061497 (R39W, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_034374
R
344
Q
PDE4C_HUMAN
Polymorphism
2229228
A
R
39
Q
2
UniProt
VAR_061497
R
344
W
PDE4C_HUMAN
Polymorphism
11879710
A
R
39
W
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PDEASE_I (A:123-134)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDEASE_I
PS00126
3'5'-cyclic nucleotide phosphodiesterases signature.
PDE4C_HUMAN
428-439
1
A:123-134
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Exons
(8, 8)
Info
All Exons
Exon 1.11 (A:1-17)
Exon 1.12 (A:18-50)
Exon 1.13 (A:51-105)
Exon 1.14 (A:106-139)
Exon 1.15 (A:139-190)
Exon 1.16 (A:191-231)
Exon 1.17 (A:232-292)
Exon 1.18 (A:293-344)
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All Exon Boundaries
1: Boundary 1.10/1.11
2: Boundary 1.11/1.12
3: Boundary 1.12/1.13
4: Boundary 1.13/1.14
5: Boundary 1.14/1.15
6: Boundary 1.15/1.16
7: Boundary 1.16/1.17
8: Boundary 1.17/1.18
9: Boundary 1.18/-
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000355502
1
ENSE00001547443
chr19:
18359010-18358981
30
PDE4C_HUMAN
-
0
0
-
-
1.2
ENST00000355502
2
ENSE00002195298
chr19:
18344210-18343760
451
PDE4C_HUMAN
1-81
81
0
-
-
1.5
ENST00000355502
5
ENSE00001608122
chr19:
18333133-18332942
192
PDE4C_HUMAN
81-145
65
0
-
-
1.6
ENST00000355502
6
ENSE00001744322
chr19:
18332107-18332071
37
PDE4C_HUMAN
145-157
13
0
-
-
1.7
ENST00000355502
7
ENSE00001650541
chr19:
18331988-18331915
74
PDE4C_HUMAN
158-182
25
0
-
-
1.8
ENST00000355502
8
ENSE00001124405
chr19:
18331733-18331684
50
PDE4C_HUMAN
182-199
18
0
-
-
1.9
ENST00000355502
9
ENSE00001124400
chr19:
18331325-18331213
113
PDE4C_HUMAN
199-236
38
0
-
-
1.10
ENST00000355502
10
ENSE00001124514
chr19:
18331129-18331036
94
PDE4C_HUMAN
237-268
32
0
-
-
1.11
ENST00000355502
11
ENSE00000690236
chr19:
18330207-18330044
164
PDE4C_HUMAN
268-322
55
1
A:1-17
17
1.12
ENST00000355502
12
ENSE00000690235
chr19:
18329848-18329750
99
PDE4C_HUMAN
323-355
33
1
A:18-50
33
1.13
ENST00000355502
13
ENSE00000690234
chr19:
18329308-18329144
165
PDE4C_HUMAN
356-410
55
1
A:51-105
55
1.14
ENST00000355502
14
ENSE00000690232
chr19:
18329058-18328959
100
PDE4C_HUMAN
411-444
34
1
A:106-139
34
1.15
ENST00000355502
15
ENSE00000690229
chr19:
18327705-18327551
155
PDE4C_HUMAN
444-495
52
1
A:139-190
52
1.16
ENST00000355502
16
ENSE00000690225
chr19:
18324300-18324178
123
PDE4C_HUMAN
496-536
41
1
A:191-231
41
1.17
ENST00000355502
17
ENSE00001773479
chr19:
18322751-18322569
183
PDE4C_HUMAN
537-597
61
1
A:232-292
61
1.18
ENST00000355502
18
ENSE00001399226
chr19:
18322086-18318771
3316
PDE4C_HUMAN
598-712
115
1
A:293-344
52
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Pfam Domains
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