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1LWI
Asym. Unit
Info
Asym.Unit (94 KB)
Biol.Unit 1 (89 KB)
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(1)
Title
:
3-ALPHA-HYDROXYSTEROID/DIHYDRODIOL DEHYDROGENASE FROM RATTUS NORVEGICUS
Authors
:
M. J. Bennett, B. P. Schlegel, J. M. Jez, T. M. Penning, M. Lewis
Date
:
24 Feb 96 (Deposition) - 07 Dec 96 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Oxidoreductase, Nad
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Bennett, B. P. Schlegel, J. M. Jez, T. M. Penning, M. Lewis
Structure Of 3 Alpha-Hydroxysteroid/Dihydrodiol Dehydrogenase Complexed With Nadp+.
Biochemistry V. 35 10702 1996
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
1b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NAP
2
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
[
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:22 , THR A:23 , THR A:24 , ASP A:50 , TYR A:55 , LYS A:84 , HIS A:117 , SER A:166 , ASN A:167 , GLN A:190 , TYR A:216 , CYS A:217 , THR A:218 , LEU A:219 , GLY A:220 , SER A:221 , ALA A:253 , LEU A:268 , ARG A:270 , SER A:271 , PHE A:272 , ARG A:276 , GLU A:279 , HOH A:351
BINDING SITE FOR RESIDUE NAP A 350
2
AC2
SOFTWARE
GLY B:22 , THR B:23 , THR B:24 , ASP B:50 , TYR B:55 , LYS B:84 , HIS B:117 , SER B:166 , ASN B:167 , GLN B:190 , TYR B:216 , CYS B:217 , THR B:218 , LEU B:219 , GLY B:220 , SER B:221 , ALA B:253 , LEU B:268 , ARG B:270 , SER B:271 , PHE B:272 , ARG B:276 , GLU B:279 , HOH B:351
BINDING SITE FOR RESIDUE NAP B 350
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: ALDOKETO_REDUCTASE_1 (A:45-62,B:45-62)
2: ALDOKETO_REDUCTASE_2 (A:151-168,B:151-168)
3: ALDOKETO_REDUCTASE_3 (A:268-283,B:268-283)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ALDOKETO_REDUCTASE_1
PS00798
Aldo/keto reductase family signature 1.
DIDH_RAT
45-62
2
A:45-62
B:45-62
2
ALDOKETO_REDUCTASE_2
PS00062
Aldo/keto reductase family signature 2.
DIDH_RAT
151-168
2
A:151-168
B:151-168
3
ALDOKETO_REDUCTASE_3
PS00063
Aldo/keto reductase family putative active site signature.
DIDH_RAT
268-283
2
A:268-283
B:268-283
[
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Exons
(9, 18)
Info
All Exons
Exon 1.1 (A:1-26 | B:1-26)
Exon 1.2 (A:30-84 | B:30-84)
Exon 1.3 (A:85-123 | B:85-123)
Exon 1.4 (A:124-149 | B:124-149)
Exon 1.5 (A:150-190 | B:150-190)
Exon 1.6 (A:191-227 (gaps) | B:191-227 (gaps...)
Exon 1.7 (A:227-282 | B:227-282)
Exon 1.8 (A:283-310 | B:283-310)
Exon 1.9 (A:310-311 | B:310-311)
View:
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All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5
06: Boundary 1.5/1.6
07: Boundary 1.6/1.7
08: Boundary 1.7/1.8
09: Boundary 1.8/1.9
10: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000023835
1
ENSRNOE00000169728
chr17:
77332903-77332778
126
DIDH_RAT
1-28
28
2
A:1-26
B:1-26
26
26
1.2
ENSRNOT00000023835
2
ENSRNOE00000165296
chr17:
77328404-77328237
168
DIDH_RAT
29-84
56
2
A:30-84
B:30-84
55
55
1.3
ENSRNOT00000023835
3
ENSRNOE00000226558
chr17:
77326224-77326108
117
DIDH_RAT
85-123
39
2
A:85-123
B:85-123
39
39
1.4
ENSRNOT00000023835
4
ENSRNOE00000226521
chr17:
77324055-77323978
78
DIDH_RAT
124-149
26
2
A:124-149
B:124-149
26
26
1.5
ENSRNOT00000023835
5
ENSRNOE00000277887
chr17:
77323455-77323333
123
DIDH_RAT
150-190
41
2
A:150-190
B:150-190
41
41
1.6
ENSRNOT00000023835
6
ENSRNOE00000226508
chr17:
77321456-77321347
110
DIDH_RAT
191-227
37
2
A:191-227 (gaps)
B:191-227 (gaps)
37
37
1.7
ENSRNOT00000023835
7
ENSRNOE00000226498
chr17:
77321080-77320915
166
DIDH_RAT
227-282
56
2
A:227-282
B:227-282
56
56
1.8
ENSRNOT00000023835
8
ENSRNOE00000226492
chr17:
77319319-77319237
83
DIDH_RAT
283-310
28
2
A:283-310
B:283-310
28
28
1.9
ENSRNOT00000023835
9
ENSRNOE00000170263
chr17:
77317784-77316459
1326
DIDH_RAT
310-322
13
2
A:310-311
B:310-311
2
2
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1lwia_ (A:)
1b: SCOP_d1lwib_ (B:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
Aldo-keto reductases (NADP)
(251)
Protein domain
:
3-alpha-hydroxysteroid dehydrogenase
(15)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(3)
1a
d1lwia_
A:
1b
d1lwib_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1lwiA00 (A:1-311)
1b: CATH_1lwiB00 (B:1-311)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
NADP-dependent oxidoreductase
(181)
Norway rat (Rattus norvegicus)
(7)
1a
1lwiA00
A:1-311
1b
1lwiB00
B:1-311
[
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Aldo_ket_red_1lwiB01 (B:18-301)
1b: PFAM_Aldo_ket_red_1lwiB02 (B:18-301)
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Clans
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)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Aldo_ket_red]
(94)
Family
:
Aldo_ket_red
(94)
Rattus norvegicus (Rat)
(6)
1a
Aldo_ket_red-1lwiB01
B:18-301
1b
Aldo_ket_red-1lwiB02
B:18-301
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