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1LV9
Asym. Unit
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Asym.Unit (176 KB)
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Models
(10 )
Title
:
CXCR3 BINDING CHEMOKINE IP-10/CXCL10
Authors
:
V. Booth, D. W. Keizer, M. B. Kamphuis, I. Clark-Lewis, B. D. Sykes
Date
:
27 May 02 (Deposition) - 18 Sep 02 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Keywords
:
Chemokine, Cytokine
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. Booth, D. W. Keizer, M. B. Kamphuis, I. Clark-Lewis, B. D. Sykes
The Cxcr3 Binding Chemokine Ip-10/Cxcl10: Structure And Receptor Interactions.
Biochemistry V. 41 10418 2002
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: N-METHYLLEUCINE (MLEa)
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No.
Name
Count
Type
Full Name
1
MLE
1
Mod. Amino Acid
N-METHYLLEUCINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SMALL_CYTOKINES_CXC (A:9-55)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SMALL_CYTOKINES_CXC
PS00471
Small cytokines (intercrine/chemokine) C-x-C subfamily signature.
CXL10_HUMAN
30-76
1
A:9-55
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Exons
(2, 2)
Info
All Exons
Exon 1.2 (A:7-42)
Exon 1.3 (A:42-70)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000306602
1
ENSE00001126423
chr4:
76944650-76944524
127
CXL10_HUMAN
1-21
21
0
-
-
1.2
ENST00000306602
2
ENSE00001139451
chr4:
76943970-76943844
127
CXL10_HUMAN
21-63
43
1
A:7-42
36
1.3
ENST00000306602
3
ENSE00001139442
chr4:
76943608-76943519
90
CXL10_HUMAN
63-93
31
1
A:42-70
29
1.4
ENST00000306602
4
ENSE00001193218
chr4:
76943101-76942273
829
CXL10_HUMAN
93-98
6
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1lv9a_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
IL8-like
(118)
Superfamily
:
Interleukin 8-like chemokines
(117)
Family
:
Interleukin 8-like chemokines
(113)
Protein domain
:
IP-10/CXCL10
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1lv9a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1lv9A00 (A:7-70)
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)
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)
Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
[code=2.40.50.40, no name defined]
(161)
[unclassified]
(41)
1a
1lv9A00
A:7-70
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_IL8_1lv9A01 (A:7-68)
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Clans
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Clan
:
no clan defined [family: IL8]
(55)
Family
:
IL8
(55)
Homo sapiens (Human)
(49)
1a
IL8-1lv9A01
A:7-68
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Chain A
Asymmetric Unit 1
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