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1LU6
Theor. Model
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Theoretical Model (39 KB)
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(1)
Title
:
THEORETICAL MODEL OF THE CARBOXY TERMINAL REGION OF HUMAN WILM'S TUMOR PROTEIN, WT1
Authors
:
R. Khurshid, A. Salim, A. Abbasi
Date
:
22 May 02 (Deposition) - 05 Jun 02 (Release) - 05 Jun 02 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A,B,C,_
#
(
#
: chains that contain no standard or modified protein/DNA/RNA residue)
Keywords
:
Wilm'S Tumor Protein, Theoretical Model, Tumor Suppressor Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Khurshid, A. Salim, A. Abbasi
Homology Model Of The Carboxy Terminal Region Of Human Wilm'S Tumor Protein, Wt1: Study Of Important Residues Implicated In Dna Binding
To Be Published
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(2, 4)
Info
All Hetero Components
1a: COBALT (II) ION (COa)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CO
1
Ligand/Ion
COBALT (II) ION
2
ZN
3
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(34, 34)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_015053 (R311Q, chain A, )
02: VAR_007743 (C329Y, chain A, )
03: VAR_015054 (M341R, chain A, )
04: VAR_043799 (C354G, chain A, )
05: VAR_015055 (C354Y, chain A, )
06: VAR_007744 (C359G, chain A, )
07: VAR_043800 (C359Y, chain A, )
08: VAR_043801 (F363L, chain A, )
09: VAR_007745 (R365C, chain A, )
10: VAR_007746 (R365H, chain A, )
11: VAR_043802 (R365L, chain A, )
12: VAR_043803 (Q368P, chain A, )
13: VAR_007747 (H372Q, chain A, )
14: VAR_015056 (H372Y, chain A, )
15: VAR_015057 (H376R, chain A, )
16: VAR_007748 (H376Y, chain A, )
17: VAR_043804 (G378C, chain A, )
18: VAR_007749 (F382L, chain A, )
19: VAR_015058 (C384R, chain A, )
20: VAR_015059 (C387F, chain A, )
21: VAR_043805 (C387R, chain A, )
22: VAR_043806 (C387Y, chain A, )
23: VAR_015060 (F391L, chain A, )
24: VAR_043807 (R393L, chain A, )
25: VAR_043808 (R393P, chain A, )
26: VAR_015061 (R393Q, chain A, )
27: VAR_007750 (R393W, chain A, )
28: VAR_007752 (D395G, chain A, )
29: VAR_007751 (D395N, chain A, )
30: VAR_043809 (D395Y, chain A, )
31: VAR_043810 (H396P, chain A, )
32: VAR_015062 (L397P, chain A, )
33: VAR_043811 (H400Y, chain A, )
34: VAR_043812 (H404R, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_015053
R
312
Q
WT1_HUMAN
Disease (NPHS4)
---
A
R
311
Q
02
UniProt
VAR_007743
C
330
Y
WT1_HUMAN
Disease (DDS)
---
A
C
329
Y
03
UniProt
VAR_015054
M
342
R
WT1_HUMAN
Disease (DDS)
---
A
M
341
R
04
UniProt
VAR_043799
C
355
G
WT1_HUMAN
Disease (WT1)
---
A
C
354
G
05
UniProt
VAR_015055
C
355
Y
WT1_HUMAN
Disease (DDS)
---
A
C
354
Y
06
UniProt
VAR_007744
C
360
G
WT1_HUMAN
Disease (DDS)
---
A
C
359
G
07
UniProt
VAR_043800
C
360
Y
WT1_HUMAN
Disease (DDS)
---
A
C
359
Y
08
UniProt
VAR_043801
F
364
L
WT1_HUMAN
Disease (NPHS4)
---
A
F
363
L
09
UniProt
VAR_007745
R
366
C
WT1_HUMAN
Disease (WT1)
---
A
R
365
C
10
UniProt
VAR_007746
R
366
H
WT1_HUMAN
Disease (WT1)
---
A
R
365
H
11
UniProt
VAR_043802
R
366
L
WT1_HUMAN
Disease (DDS)
---
A
R
365
L
12
UniProt
VAR_043803
Q
369
P
WT1_HUMAN
Disease (DDS)
---
A
Q
368
P
13
UniProt
VAR_007747
H
373
Q
WT1_HUMAN
Disease (WT1)
---
A
H
372
Q
14
UniProt
VAR_015056
H
373
Y
WT1_HUMAN
Disease (DDS)
---
A
H
372
Y
15
UniProt
VAR_015057
H
377
R
WT1_HUMAN
Disease (DDS)
---
A
H
376
R
16
UniProt
VAR_007748
H
377
Y
WT1_HUMAN
Disease (NPHS4)
---
A
H
376
Y
17
UniProt
VAR_043804
G
379
C
WT1_HUMAN
Disease (NPHS4)
---
A
G
378
C
18
UniProt
VAR_007749
F
383
L
WT1_HUMAN
Disease (NPHS4)
---
A
F
382
L
19
UniProt
VAR_015058
C
385
R
WT1_HUMAN
Disease (DDS)
---
A
C
384
R
20
UniProt
VAR_015059
C
388
F
WT1_HUMAN
Disease (DDS)
---
A
C
387
F
21
UniProt
VAR_043805
C
388
R
WT1_HUMAN
Disease (NPHS4)
---
A
C
387
R
22
UniProt
VAR_043806
C
388
Y
WT1_HUMAN
Disease (DDS)
---
A
C
387
Y
23
UniProt
VAR_015060
F
392
L
WT1_HUMAN
Disease (FS)
---
A
F
391
L
24
UniProt
VAR_043807
R
394
L
WT1_HUMAN
Disease (WT1)
---
A
R
393
L
25
UniProt
VAR_043808
R
394
P
WT1_HUMAN
Disease (DDS)
---
A
R
393
P
26
UniProt
VAR_015061
R
394
Q
WT1_HUMAN
Disease (DDS)
---
A
R
393
Q
27
UniProt
VAR_007750
R
394
W
WT1_HUMAN
Disease (WT1)
---
A
R
393
W
28
UniProt
VAR_007752
D
396
G
WT1_HUMAN
Disease (DDS)
---
A
D
395
G
29
UniProt
VAR_007751
D
396
N
WT1_HUMAN
Disease (NPHS4)
---
A
D
395
N
30
UniProt
VAR_043809
D
396
Y
WT1_HUMAN
Disease (DDS)
---
A
D
395
Y
31
UniProt
VAR_043810
H
397
P
WT1_HUMAN
Disease (NPHS4)
---
A
H
396
P
32
UniProt
VAR_015062
L
398
P
WT1_HUMAN
Disease (DDS)
---
A
L
397
P
33
UniProt
VAR_043811
H
401
Y
WT1_HUMAN
Disease (DDS)
---
A
H
400
Y
34
UniProt
VAR_043812
H
405
R
WT1_HUMAN
Disease (DDS)
---
A
H
404
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ZINC_FINGER_C2H2_1 (A:324-346|A:354-376|A:384-404|A:41...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_FINGER_C2H2_1
PS00028
Zinc finger C2H2 type domain signature.
WT1_HUMAN
325-347
355-377
385-405
416-438
4
A:324-346
A:354-376
A:384-404
A:415-437
[
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]
Exons
(0, 0)
Info
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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Pfam Domains
(0, 0)
Info
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