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1LS6
Asym. Unit
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Asym.Unit (57 KB)
Biol.Unit 1 (53 KB)
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(1)
Title
:
HUMAN SULT1A1 COMPLEXED WITH PAP AND P-NITROPHENOL
Authors
:
N. U. Gamage, A. C. Barnett, M. Tresillian, C. F. Latham, N. E. Liyou, M. E. Mcmanus, J. L. Martin
Date
:
17 May 02 (Deposition) - 05 Aug 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Sult 1A1, Pap, P-Nitrophenol, Positive Cooperativity, Two Substrate Binding Sites, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. U. Gamage, R. G. Duggleby, A. C. Barnett, M. Tresillian, C. F. Latham, N. E. Liyou, M. E. Mcmanus, J. L. Martin
Structure Of A Human Carcinogen-Converting Enzyme, Sult1A1. Structural And Kinetic Implications Of Substrate Inhibition.
J. Biol. Chem. V. 278 7655 2003
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pa)
2a: P-NITROPHENOL (NPOa)
2b: P-NITROPHENOL (NPOb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
A3P
1
Ligand/Ion
ADENOSINE-3'-5'-DIPHOSPHATE
2
NPO
2
Ligand/Ion
P-NITROPHENOL
[
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]
Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:48 , SER A:49 , GLY A:50 , THR A:51 , THR A:52 , TRP A:53 , ARG A:130 , SER A:138 , TYR A:193 , THR A:227 , SER A:228 , PHE A:229 , MET A:232 , PHE A:255 , MET A:256 , ARG A:257 , LYS A:258 , GLY A:259 , HOH A:1010 , HOH A:1019 , HOH A:1021 , HOH A:1024 , HOH A:1031
BINDING SITE FOR RESIDUE A3P A 2001
2
AC2
SOFTWARE
ILE A:21 , PHE A:81 , LYS A:106 , HIS A:108 , PHE A:142 , VAL A:148 , HIS A:149 , PHE A:247 , MET A:248 , HOH A:1031 , HOH A:1118 , NPO A:4001
BINDING SITE FOR RESIDUE NPO A 3001
3
AC3
SOFTWARE
PHE A:76 , PHE A:81 , PHE A:84 , ILE A:89 , TYR A:240 , PHE A:247 , MET A:248 , HOH A:1004 , NPO A:3001
BINDING SITE FOR RESIDUE NPO A 4001
[
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SAPs(SNPs)/Variants
(7, 7)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_009302 (R37Q, chain A, )
2: VAR_028721 (E151D, chain A, )
3: VAR_057339 (E151Q, chain A, )
4: VAR_007425 (H213H, chain A, )
5: VAR_009303 (M223M, chain A, )
6: VAR_014889 (N235T, chain A, )
7: VAR_061886 (E282K, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_009302
R
37
Q
ST1A1_HUMAN
Polymorphism
---
A
R
37
Q
2
UniProt
VAR_028721
E
151
D
ST1A1_HUMAN
Polymorphism
1042014
A
E
151
D
3
UniProt
VAR_057339
E
151
Q
ST1A1_HUMAN
Polymorphism
1042011
A
E
151
Q
4
UniProt
VAR_007425
R
213
H
ST1A1_HUMAN
Polymorphism
9282861
A
H
213
H
5
UniProt
VAR_009303
V
223
M
ST1A1_HUMAN
Polymorphism
1801030
A
M
223
M
6
UniProt
VAR_014889
N
235
T
ST1A1_HUMAN
Polymorphism
35728980
A
N
235
T
7
UniProt
VAR_061886
E
282
K
ST1A1_HUMAN
Polymorphism
36043491
A
E
282
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(7, 7)
Info
All Exons
Exon 1.4d (A:8-50)
Exon 1.5 (A:50-92)
Exon 1.6 (A:92-124)
Exon 1.7b (A:125-167)
Exon 1.8 (A:167-198)
Exon 1.9 (A:199-259)
Exon 1.10a (A:259-295)
View:
Select:
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All Exon Boundaries
1: Boundary 1.3a/1.4d
2: Boundary 1.4d/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.7b
5: Boundary 1.7b/1.8
6: Boundary 1.8/1.9
7: Boundary 1.9/1.10a
8: Boundary 1.10a/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000395609
1b
ENSE00001936796
chr16:
28634874-28634452
423
ST1A1_HUMAN
-
0
0
-
-
1.2
ENST00000395609
2
ENSE00001738838
chr16:
28631454-28631384
71
ST1A1_HUMAN
-
0
0
-
-
1.3a
ENST00000395609
3a
ENSE00001522261
chr16:
28621512-28621252
261
ST1A1_HUMAN
-
0
0
-
-
1.4d
ENST00000395609
4d
ENSE00001701423
chr16:
28620180-28620029
152
ST1A1_HUMAN
1-50
50
1
A:8-50
43
1.5
ENST00000395609
5
ENSE00001713683
chr16:
28619924-28619799
126
ST1A1_HUMAN
50-92
43
1
A:50-92
43
1.6
ENST00000395609
6
ENSE00001674358
chr16:
28619709-28619612
98
ST1A1_HUMAN
92-124
33
1
A:92-124
33
1.7b
ENST00000395609
7b
ENSE00001612517
chr16:
28618398-28618272
127
ST1A1_HUMAN
125-167
43
1
A:125-167
43
1.8
ENST00000395609
8
ENSE00001795988
chr16:
28618176-28618082
95
ST1A1_HUMAN
167-198
32
1
A:167-198
32
1.9
ENST00000395609
9
ENSE00001697268
chr16:
28617557-28617377
181
ST1A1_HUMAN
199-259
61
1
A:199-259
61
1.10a
ENST00000395609
10a
ENSE00001291275
chr16:
28617254-28616918
337
ST1A1_HUMAN
259-295
37
1
A:259-295
37
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ls6a_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
PAPS sulfotransferase
(54)
Protein domain
:
Aryl sulfotransferase sult1a
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1ls6a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1ls6A00 (A:8-295)
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)
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)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
1ls6A00
A:8-295
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Sulfotransfer_1_1ls6A01 (A:38-288)
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Clans
(
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(
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Organisms
(
)
(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
Sulfotransfer_1
(24)
Homo sapiens (Human)
(16)
1a
Sulfotransfer_1-1ls6A01
A:38-288
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Asymmetric Unit 1
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