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Theor. Model
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Theoretical Model (41 KB)
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Title
:
THEORETIC MODEL OF THE HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR YWTD BETA-PROPELLER DOMAIN
Authors
:
T. A. Springer
Date
:
15 Sep 98 (Deposition) - 13 Jan 99 (Release) - 29 Dec 99 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : B
Keywords
:
Lipoprotein Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. A. Springer
An Extracellular Beta-Propeller Module Predicted In Lipoprotein And Scavenger Receptors, Tyrosine Kinases, Epidermal Growth Factor Precursor, And Extracellular Matrix Components
J. Mol. Biol. V. 283 837 1998
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Label:
Sorry, no Info available
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]
Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(55, 55)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_005376 (A399D, chain B, )
02: VAR_005377 (L401H, chain B, )
03: VAR_007987 (L401V, chain B, )
04: VAR_008995 (F403L, chain B, )
05: VAR_072846 (T404P, chain B, )
06: VAR_013954 (R406Q, chain B, )
07: VAR_072847 (R406W, chain B, )
08: VAR_005378 (E408K, chain B, )
09: VAR_005379 (L414R, chain B, )
10: VAR_062379 (D415G, chain B, )
11: VAR_005380 (R416Q, chain B, )
12: VAR_005381 (R416W, chain B, )
13: VAR_005382 (I423T, chain B, )
14: VAR_005383 (V429M, chain B, )
15: VAR_005384 (A431T, chain B, )
16: VAR_007988 (L432V, chain B, )
17: VAR_005385 (D433H, chain B, )
18: VAR_005386 (T434K, chain B, )
19: VAR_005388 (I441M, chain B, )
20: VAR_005387 (I441N, chain B, )
21: VAR_072848 (Y442H, chain B, )
22: VAR_005389 (W443C, chain B, )
23: VAR_062380 (I451T, chain B, )
24: VAR_072849 (T454N, chain B, )
25: VAR_011863 (V468I, chain B, )
26: VAR_065783 (R471G, chain B, )
27: VAR_005390 (G478R, chain B, )
28: VAR_062381 (L479P, chain B, )
29: VAR_005391 (D482H, chain B, )
30: VAR_005392 (W483R, chain B, )
31: VAR_005394 (H485R, chain B, )
32: VAR_072850 (D492N, chain B, )
33: VAR_005395 (V523M, chain B, )
34: VAR_005396 (P526S, chain B, )
35: VAR_005397 (G546D, chain B, )
36: VAR_005398 (G549D, chain B, )
37: VAR_005399 (N564H, chain B, )
38: VAR_005400 (N564S, chain B, )
39: VAR_005401 (G565V, chain B, )
40: VAR_008996 (L568V, chain B, )
41: VAR_072851 (R574C, chain B, )
42: VAR_072852 (R574H, chain B, )
43: VAR_072853 (W577G, chain B, )
44: VAR_072854 (W577S, chain B, )
45: VAR_005402 (D579N, chain B, )
46: VAR_062382 (D579Y, chain B, )
47: VAR_072855 (I585T, chain B, )
48: VAR_005403 (G592E, chain B, )
49: VAR_072856 (R595W, chain B, )
50: VAR_005404 (L599S, chain B, )
51: VAR_072857 (D601H, chain B, )
52: VAR_007989 (P608S, chain B, )
53: VAR_005405 (R633C, chain B, )
54: VAR_072858 (V639D, chain B, )
55: VAR_005406 (P649L, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_005376
A
399
D
LDLR_HUMAN
Disease (FH)
---
B
A
399
D
02
UniProt
VAR_005377
L
401
H
LDLR_HUMAN
Unclassified
---
B
L
401
H
03
UniProt
VAR_007987
L
401
V
LDLR_HUMAN
Disease (FH)
---
B
L
401
V
04
UniProt
VAR_008995
F
403
L
LDLR_HUMAN
Disease (FH)
---
B
F
403
L
05
UniProt
VAR_072846
T
404
P
LDLR_HUMAN
Unclassified
---
B
T
404
P
06
UniProt
VAR_013954
R
406
Q
LDLR_HUMAN
Unclassified
---
B
R
406
Q
07
UniProt
VAR_072847
R
406
W
LDLR_HUMAN
Unclassified
---
B
R
406
W
08
UniProt
VAR_005378
E
408
K
LDLR_HUMAN
Unclassified
---
B
E
408
K
09
UniProt
VAR_005379
L
414
R
LDLR_HUMAN
Disease (FH)
---
B
L
414
R
10
UniProt
VAR_062379
D
415
G
LDLR_HUMAN
Disease (FH)
---
B
D
415
G
11
UniProt
VAR_005380
R
416
Q
LDLR_HUMAN
Disease (FH)
---
B
R
416
Q
12
UniProt
VAR_005381
R
416
W
LDLR_HUMAN
Disease (FH)
---
B
R
416
W
13
UniProt
VAR_005382
I
423
T
LDLR_HUMAN
Disease (FH)
---
B
I
423
T
14
UniProt
VAR_005383
V
429
M
LDLR_HUMAN
Disease (FH)
28942078
B
V
429
M
15
UniProt
VAR_005384
A
431
T
LDLR_HUMAN
Unclassified
28942079
B
A
431
T
16
UniProt
VAR_007988
L
432
V
LDLR_HUMAN
Disease (FH)
---
B
L
432
V
17
UniProt
VAR_005385
D
433
H
LDLR_HUMAN
Disease (FH)
---
B
D
433
H
18
UniProt
VAR_005386
T
434
K
LDLR_HUMAN
Unclassified
---
B
T
434
K
19
UniProt
VAR_005388
I
441
M
LDLR_HUMAN
Unclassified
---
B
I
441
M
20
UniProt
VAR_005387
I
441
N
LDLR_HUMAN
Unclassified
---
B
I
441
N
21
UniProt
VAR_072848
Y
442
H
LDLR_HUMAN
Unclassified
---
B
Y
442
H
22
UniProt
VAR_005389
W
443
C
LDLR_HUMAN
Unclassified
---
B
W
443
C
23
UniProt
VAR_062380
I
451
T
LDLR_HUMAN
Disease (FH)
---
B
I
451
T
24
UniProt
VAR_072849
T
454
N
LDLR_HUMAN
Disease (FH)
---
B
T
454
N
25
UniProt
VAR_011863
V
468
I
LDLR_HUMAN
Polymorphism
5932
B
V
468
I
26
UniProt
VAR_065783
R
471
G
LDLR_HUMAN
Unclassified
---
B
R
471
G
27
UniProt
VAR_005390
G
478
R
LDLR_HUMAN
Unclassified
---
B
G
478
R
28
UniProt
VAR_062381
L
479
P
LDLR_HUMAN
Disease (FH)
---
B
L
479
P
29
UniProt
VAR_005391
D
482
H
LDLR_HUMAN
Disease (FH)
---
B
D
482
H
30
UniProt
VAR_005392
W
483
R
LDLR_HUMAN
Disease (FH)
---
B
W
483
R
31
UniProt
VAR_005394
H
485
R
LDLR_HUMAN
Unclassified
---
B
H
485
R
32
UniProt
VAR_072850
D
492
N
LDLR_HUMAN
Unclassified
---
B
D
492
N
33
UniProt
VAR_005395
V
523
M
LDLR_HUMAN
Disease (FH)
28942080
B
V
523
M
34
UniProt
VAR_005396
P
526
S
LDLR_HUMAN
Unclassified
---
B
P
526
S
35
UniProt
VAR_005397
G
546
D
LDLR_HUMAN
Polymorphism
28942081
B
G
546
D
36
UniProt
VAR_005398
G
549
D
LDLR_HUMAN
Disease (FH)
28941776
B
G
549
D
37
UniProt
VAR_005399
N
564
H
LDLR_HUMAN
Disease (FH)
28942086
B
N
564
H
38
UniProt
VAR_005400
N
564
S
LDLR_HUMAN
Disease (FH)
---
B
N
564
S
39
UniProt
VAR_005401
G
565
V
LDLR_HUMAN
Polymorphism
28942082
B
G
565
V
40
UniProt
VAR_008996
L
568
V
LDLR_HUMAN
Disease (FH)
---
B
L
568
V
41
UniProt
VAR_072851
R
574
C
LDLR_HUMAN
Disease (FH)
---
B
R
574
C
42
UniProt
VAR_072852
R
574
H
LDLR_HUMAN
Unclassified
---
B
R
574
H
43
UniProt
VAR_072853
W
577
G
LDLR_HUMAN
Disease (FH)
---
B
W
577
G
44
UniProt
VAR_072854
W
577
S
LDLR_HUMAN
Unclassified
---
B
W
577
S
45
UniProt
VAR_005402
D
579
N
LDLR_HUMAN
Disease (FH)
---
B
D
579
N
46
UniProt
VAR_062382
D
579
Y
LDLR_HUMAN
Disease (FH)
---
B
D
579
Y
47
UniProt
VAR_072855
I
585
T
LDLR_HUMAN
Unclassified
---
B
I
585
T
48
UniProt
VAR_005403
G
592
E
LDLR_HUMAN
Disease (FH)
---
B
G
592
E
49
UniProt
VAR_072856
R
595
W
LDLR_HUMAN
Unclassified
---
B
R
595
W
50
UniProt
VAR_005404
L
599
S
LDLR_HUMAN
Unclassified
---
B
L
599
S
51
UniProt
VAR_072857
D
601
H
LDLR_HUMAN
Unclassified
---
B
D
601
H
52
UniProt
VAR_007989
P
608
S
LDLR_HUMAN
Disease (FH)
---
B
P
608
S
53
UniProt
VAR_005405
R
633
C
LDLR_HUMAN
Disease (FH)
---
B
R
633
C
54
UniProt
VAR_072858
V
639
D
LDLR_HUMAN
Disease (FH)
---
B
V
639
D
55
UniProt
VAR_005406
P
649
L
LDLR_HUMAN
Disease (FH)
---
B
P
649
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 5)
Info
All PROSITE Patterns/Profiles
1: LDLRB (B:439-485|B:486-528|B:529-572|B:57...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LDLRB
PS51120
LDL-receptor class B (LDLRB) repeat profile.
LDLR_HUMAN
439-485
486-528
529-572
573-617
618-658
5
B:439-485
B:486-528
B:529-572
B:573-617
B:618-658
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