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1LLZ
Asym. Unit
Info
Asym.Unit (237 KB)
Biol.Unit 1 (230 KB)
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(1)
Title
:
STRUCTURAL STUDIES ON THE SYNCHRONIZATION OF CATALYTIC CENTERS IN GLUTAMATE SYNTHASE: REDUCED ENZYME
Authors
:
R. H. Van Den Heuvel, D. Ferrari, R. T. Bossi, S. Ravasio, B. Curti, M. A F. J. Florencio, A. Mattevi
Date
:
30 Apr 02 (Deposition) - 31 Jul 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Glutamate Synthase, Channeling, Amidotransferase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. H. Van Den Heuvel, D. Ferrari, R. T. Bossi, S. Ravasio, B. Curti, M. A. Vanoni, F. J. Florencio, A. Mattevi
Structural Studies On The Synchronization Of Catalytic Centers In Glutamate Synthase
J. Biol. Chem. V. 277 24579 2002
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: FE3-S4 CLUSTER (F3Sa)
2a: FLAVIN MONONUCLEOTIDE (FMNa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
F3S
1
Ligand/Ion
FE3-S4 CLUSTER
2
FMN
1
Ligand/Ion
FLAVIN MONONUCLEOTIDE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:874 , MET A:875 , SER A:876 , GLU A:903 , GLN A:944 , LYS A:966 , LYS A:1034 , GLY A:1063 , GLY A:1064 , THR A:1065 , GLY A:1066 , ASP A:1105 , GLY A:1106 , GLY A:1107 , GLY A:1128 , SER A:1129 , ILE A:1130
BINDING SITE FOR RESIDUE FMN A 2070
2
AC2
SOFTWARE
MET A:475 , CYS A:1137 , ILE A:1138 , MET A:1139 , ALA A:1140 , ARG A:1141 , VAL A:1142 , CYS A:1143 , CYS A:1148
BINDING SITE FOR RESIDUE F3S A 2072
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: GATASE_TYPE_2 (A:1-395)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GATASE_TYPE_2
PS51278
Glutamine amidotransferase type 2 domain profile.
GLTS_SYNY3
37-431
1
A:1-395
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d1llza1 (A:1240-1507)
2a: SCOP_d1llza3 (A:1-422)
3a: SCOP_d1llza2 (A:439-1239)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Single-stranded right-handed beta-helix
(140)
Superfamily
:
Alpha subunit of glutamate synthase, C-terminal domain
(7)
Family
:
Alpha subunit of glutamate synthase, C-terminal domain
(7)
Protein domain
:
Alpha subunit of glutamate synthase, C-terminal domain
(7)
Synechocystis sp. [TaxId: 1143]
(5)
1a
d1llza1
A:1240-1507
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Class II glutamine amidotransferases
(27)
Protein domain
:
Alpha subunit of glutamate synthase, N-terminal domain
(7)
Synechocystis sp. [TaxId: 1143]
(5)
2a
d1llza3
A:1-422
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
FMN-linked oxidoreductases
(290)
Family
:
FMN-linked oxidoreductases
(242)
Protein domain
:
Alpha subunit of glutamate synthase, central and FMN domains
(7)
Synechocystis sp. [TaxId: 1143]
(5)
3a
d1llza2
A:439-1239
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CATH Domains
(3, 4)
Info
all CATH domains
1a: CATH_1llzA01 (A:1-421,A:525-533)
2a: CATH_1llzA02 (A:422-470,A:482-524,A:534-786)
2b: CATH_1llzA03 (A:471-481,A:787-1244)
3a: CATH_1llzA04 (A:1245-1507)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(128)
Homologous Superfamily
:
Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
(124)
Pcc 6803 (Synechocystis sp)
(3)
1a
1llzA01
A:1-421,A:525-533
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Pcc 6803 (Synechocystis sp)
(3)
2a
1llzA02
A:422-470,A:482-524,A:534-786
2b
1llzA03
A:471-481,A:787-1244
Class
:
Mainly Beta
(13760)
Architecture
:
3 Solenoid
(196)
Topology
:
Pectate Lyase C-like
(105)
Homologous Superfamily
:
[code=2.160.20.60, no name defined]
(6)
Pcc 6803 (Synechocystis sp)
(3)
3a
1llzA04
A:1245-1507
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Pfam Domains
(4, 4)
Info
all PFAM domains
1a: PFAM_GATase_2_1llzA01 (A:1-368)
2a: PFAM_Glu_syn_central_1llzA02 (A:443-739)
3a: PFAM_Glu_synthase_1llzA03 (A:795-1191)
4a: PFAM_GXGXG_1llzA04 (A:1269-1464)
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Organisms
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)
Clan
:
NTN
(93)
Family
:
GATase_2
(9)
Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
(5)
1a
GATase_2-1llzA01
A:1-368
Clan
:
TIM_barrel
(694)
Family
:
Glu_syn_central
(5)
Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
(5)
2a
Glu_syn_central-1llzA02
A:443-739
Family
:
Glu_synthase
(5)
Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
(5)
3a
Glu_synthase-1llzA03
A:795-1191
Clan
:
no clan defined [family: GXGXG]
(5)
Family
:
GXGXG
(5)
Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
(5)
4a
GXGXG-1llzA04
A:1269-1464
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Asymmetric Unit 1
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Asym.Unit (237 KB)
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