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1LL6
Biol. Unit 4
Info
Asym.Unit (253 KB)
Biol.Unit 1 (66 KB)
Biol.Unit 2 (65 KB)
Biol.Unit 3 (65 KB)
Biol.Unit 4 (66 KB)
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(1)
Title
:
STRUCTURE OF THE D169N MUTANT OF C. IMMITIS CHITINASE 1
Authors
:
K. Bortone, A. F. Monzingo, S. Ernst, J. D. Robertus
Date
:
26 Apr 02 (Deposition) - 18 Dec 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Beta-Alpha Barrel, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Bortone, A. F. Monzingo, S. Ernst, J. D. Robertus
The Structure Of An Allosamidin Complex With The Coccidioides Immitis Chitinase Defines A Role For A Second Acid Residue In Substrate-Assisted Mechanism
J. Mol. Biol. V. 320 293 2002
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_CHI1_COCPS_003 (N103K, chain D, )
2: VAR_CHI1_COCPS_004 (I109T, chain D, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_CHI1_COCPS_003
*
N
103
K
CHI1_COCPS
---
---
D
N
103
K
2
UniProt
VAR_CHI1_COCPS_004
*
I
109
T
CHI1_COCPS
---
---
D
I
109
T
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: CHITINASE_18 (D:163-171)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CHITINASE_18
PS01095
Chitinases family 18 active site.
CHI1_COCP7
163-171
1
-
-
-
D:163-171
CHI1_COCPS
163-171
1
-
-
-
D:163-171
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d1ll6a2 (A:293-354)
1b: SCOP_d1ll6b2 (B:293-354)
1c: SCOP_d1ll6c2 (C:293-354)
1d: SCOP_d1ll6d2 (D:293-354)
2a: SCOP_d1ll6a1 (A:36-292,A:355-427)
2b: SCOP_d1ll6b1 (B:36-292,B:355-427)
2c: SCOP_d1ll6c1 (C:36-292,C:355-427)
2d: SCOP_d1ll6d1 (D:36-292,D:355-427)
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Protein Domains
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FKBP-like
(309)
Superfamily
:
Chitinase insertion domain
(107)
Family
:
Chitinase insertion domain
(107)
Protein domain
:
Chitinase 1
(18)
Fungus (Coccidioides immitis) [TaxId: 5501]
(4)
1a
d1ll6a2
A:293-354
1b
d1ll6b2
B:293-354
1c
d1ll6c2
C:293-354
1d
d1ll6d2
D:293-354
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
Type II chitinase
(131)
Protein domain
:
Chitinase 1
(18)
Fungus (Coccidioides immitis) [TaxId: 5501]
(4)
2a
d1ll6a1
A:36-292,A:355-427
2b
d1ll6b1
B:36-292,B:355-427
2c
d1ll6c1
C:36-292,C:355-427
2d
d1ll6d1
D:36-292,D:355-427
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_1ll6A01 (A:36-291,A:355-427)
1b: CATH_1ll6B01 (B:36-291,B:355-427)
1c: CATH_1ll6C01 (C:36-291,C:355-427)
1d: CATH_1ll6D01 (D:36-291,D:355-427)
2a: CATH_1ll6A02 (A:292-354)
2b: CATH_1ll6B02 (B:292-354)
2c: CATH_1ll6C02 (C:292-354)
2d: CATH_1ll6D02 (D:292-354)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Glycosidases
(843)
Coccidioides immitis. Organism_taxid: 5501.
(3)
1a
1ll6A01
A:36-291,A:355-427
1b
1ll6B01
B:36-291,B:355-427
1c
1ll6C01
C:36-291,C:355-427
1d
1ll6D01
D:36-291,D:355-427
Architecture
:
Roll
(3276)
Topology
:
Chitinase A; domain 3
(225)
Homologous Superfamily
:
[code=3.10.50.10, no name defined]
(121)
Coccidioides immitis. Organism_taxid: 5501.
(3)
2a
1ll6A02
A:292-354
2b
1ll6B02
B:292-354
2c
1ll6C02
C:292-354
2d
1ll6D02
D:292-354
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Glyco_hydro_18_1ll6D01 (D:38-383)
1b: PFAM_Glyco_hydro_18_1ll6D02 (D:38-383)
1c: PFAM_Glyco_hydro_18_1ll6D03 (D:38-383)
1d: PFAM_Glyco_hydro_18_1ll6D04 (D:38-383)
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Clan
:
Glyco_hydro_tim
(488)
Family
:
Glyco_hydro_18
(72)
Coccidioides posadasii (strain RMSCC 757 / Silveira) (Valley fever fungus)
(3)
1a
Glyco_hydro_18-1ll6D01
D:38-383
1b
Glyco_hydro_18-1ll6D02
D:38-383
1c
Glyco_hydro_18-1ll6D03
D:38-383
1d
Glyco_hydro_18-1ll6D04
D:38-383
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (253 KB)
Header - Asym.Unit
Biol.Unit 1 (66 KB)
Header - Biol.Unit 1
Biol.Unit 2 (65 KB)
Header - Biol.Unit 2
Biol.Unit 3 (65 KB)
Header - Biol.Unit 3
Biol.Unit 4 (66 KB)
Header - Biol.Unit 4
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