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1LKJ
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Models
(31 )
Title
:
NMR STRUCTURE OF APO CALMODULIN FROM YEAST SACCHAROMYCES CEREVISIAE
Authors
:
H. Ishida, K. Nakashima, Y. Kumaki, M. Nakata, K. Hikichi, M. Yazawa
Date
:
25 Apr 02 (Deposition) - 29 Apr 03 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (31 x)
Keywords
:
Yeast Calmodulin, Saccharomyces Cerevisiae, Ef-Hand, Nmr, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ishida, K. Nakashima, Y. Kumaki, M. Nakata, K. Hikichi, M. Yazawa
The Solution Structure Of Apocalmodulin From Saccharomyces Cerevisiae Implies A Mechanism For Its Unique Ca2+ Binding Property.
Biochemistry V. 41 15536 2002
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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PROSITE Patterns/Profiles
(2, 6)
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1: EF_HAND_2 (A:7-42|A:43-78|A:80-115)
2: EF_HAND_1 (A:20-32|A:56-68|A:93-105)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM_YEAST
8-43
44-79
81-116
3
A:7-42
A:43-78
A:80-115
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM_YEAST
21-33
57-69
94-106
3
A:20-32
A:56-68
A:93-105
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Exons
(1, 1)
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Exon 1.1 (A:1-146)
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1: Boundary -/1.1
2: Boundary 1.1/-
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ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YBR109C
1
YBR109C.1
II:458356-457913
444
CALM_YEAST
1-147
147
1
A:1-146
146
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SCOP Domains
(1, 1)
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1a: SCOP_d1lkja_ (A:)
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Class
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All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(4)
1a
d1lkja_
A:
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CATH Domains
(1, 2)
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1a: CATH_1lkjA01 (A:5-78)
1b: CATH_1lkjA02 (A:79-145)
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Class
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Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Baker's yeast (Saccharomyces cerevisiae)
(8)
1a
1lkjA01
A:5-78
1b
1lkjA02
A:79-145
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Pfam Domains
(1, 2)
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all PFAM domains
1a: PFAM_EF_hand_5_1lkjA01 (A:84-144)
1b: PFAM_EF_hand_5_1lkjA02 (A:84-144)
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EF_hand
(270)
Family
:
EF_hand_5
(126)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
1a
EF_hand_5-1lkjA01
A:84-144
1b
EF_hand_5-1lkjA02
A:84-144
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