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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
1LI1
Asym. Unit
Info
Asym.Unit (241 KB)
Biol.Unit 1 (235 KB)
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(1)
Title
:
THE 1.9-A CRYSTAL STRUCTURE OF THE NONCOLLAGENOUS (NC1) DOMAIN OF HUMAN PLACENTA COLLAGEN IV SHOWS STABILIZATION VIA A NOVEL TYPE OF COVALENT MET-LYS CROSS-LINK
Authors
:
M. E. Than, S. Henrich, R. Huber, A. Ries, K. Mann, K. Kuhn, R. Timpl, G. P. Bourenkov, H. D. Bartunik, W. Bode
Date
:
17 Apr 02 (Deposition) - 22 May 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Basement Membrane, Collagen Iv, Nc1 Domain, Covalent Cross- Link, Protein-Protein Interaction, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. E. Than, S. Henrich, R. Huber, A. Ries, K. Mann, K. Kuhn, R. Timpl, G. P. Bourenkov, H. D. Bartunik, W. Bode
The 1. 9-A Crystal Structure Of The Noncollagenous (Nc1) Domain Of Human Placenta Collagen Iv Shows Stabilization Via A Novel Type Of Covalent Met-Lys Cross-Link.
Proc. Natl. Acad. Sci. Usa V. 99 6607 2002
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 9)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
9
Ligand/Ion
ACETATE ION
[
close Hetero Component info
]
Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:185 , ALA A:186 , PHE D:64 , ASN D:66 , HOH D:2070 , TYR E:189
BINDING SITE FOR RESIDUE ACT E 2001
2
AC2
SOFTWARE
PHE A:64 , ASN A:66 , HOH A:2042 , TYR B:189 , TYR D:185 , ALA D:186
BINDING SITE FOR RESIDUE ACT B 2002
3
AC3
SOFTWARE
ALA B:186 , HOH B:2171 , TYR D:189 , TYR F:64 , TYR F:72
BINDING SITE FOR RESIDUE ACT B 2003
4
AC4
SOFTWARE
TYR A:189 , TYR C:64 , TYR C:72 , HOH C:2091 , TYR E:185 , ALA E:186
BINDING SITE FOR RESIDUE ACT C 2004
5
AC5
SOFTWARE
TYR C:185 , ALA C:186 , HOH C:2135 , PHE E:64 , ASN E:66 , TYR F:189
BINDING SITE FOR RESIDUE ACT C 2005
6
AC6
SOFTWARE
PHE B:64 , ASN B:66 , ASN B:72 , HOH B:2123 , TYR C:189 , TYR F:185 , ALA F:186
BINDING SITE FOR RESIDUE ACT B 2006
7
AC7
SOFTWARE
ALA B:212 , GLY B:213 , GLU B:214 , LEU B:215 , ARG B:216
BINDING SITE FOR RESIDUE ACT B 2007
8
AC8
SOFTWARE
HOH B:2175 , ARG D:102 , ARG E:198 , MET E:201 , PHE E:202 , HOH E:2041
BINDING SITE FOR RESIDUE ACT D 2008
9
AC9
SOFTWARE
ARG A:102 , HOH A:2171 , ARG B:198 , MET B:201 , PHE B:202 , HOH B:2059 , HOH B:2170 , HOH E:2170
BINDING SITE FOR RESIDUE ACT A 2009
[
close Site info
]
SAPs(SNPs)/Variants
(2, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_064499 (G140R, chain A/B/D/E, )
2: VAR_067558 (A207T, chain C/F, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_064499
G
1580
R
CO4A1_HUMAN
Disease (POREN1)
---
A/B/D/E
G
140
R
2
UniProt
VAR_067558
A
1690
T
CO4A2_HUMAN
Polymorphism
201105747
C/F
A
207
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: NC1_IV (A:5-229,B:5-229,D:5-229,E:5-229,C:...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NC1_IV
PS51403
Collagen IV carboxyl-terminal non-collagenous (NC1) domain profile.
CO4A1_HUMAN
1445-1669
4
A:5-229
B:5-229
D:5-229
E:5-229
CO4A2_HUMAN
1489-1712
2
C:5-229
F:5-229
[
close PROSITE info
]
Exons
(8, 26)
Info
All Exons
Exon 1.49a (C:5-48 | F:4-48)
Exon 1.51a (C:48-145 (gaps) | F:48-145 (gaps))
Exon 1.52b (C:146-229 | F:146-229)
Exon 2.48a (A:2-48 | B:3-48 | D:2-48 | E:3-48)
Exon 2.49a (A:48-107 | B:48-107 | D:48-107 | E...)
Exon 2.50 (A:107-145 | B:107-145 | D:107-145 ...)
Exon 2.51 (A:146-203 | B:146-203 | D:146-203 ...)
Exon 2.52b (A:203-229 | B:203-229 | D:203-229 ...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.48/1.49a
02: Boundary 1.49a/1.51a
03: Boundary 1.51a/1.52b
04: Boundary 1.52b/-
05: Boundary 2.47a/2.48a
06: Boundary 2.48a/2.49a
07: Boundary 2.49a/2.50
08: Boundary 2.50/2.51
09: Boundary 2.51/2.52b
10: Boundary 2.52b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000360467
2a
ENSE00001888071
chr13:
110959614-110959875
262
CO4A2_HUMAN
-
0
0
-
-
1.3
ENST00000360467
3
ENSE00002157738
chr13:
110960207-110960294
88
CO4A2_HUMAN
1-15
15
0
-
-
1.4
ENST00000360467
4
ENSE00001345176
chr13:
110960416-110960470
55
CO4A2_HUMAN
15-33
19
0
-
-
1.6
ENST00000360467
6
ENSE00001345173
chr13:
111009819-111009899
81
CO4A2_HUMAN
34-60
27
0
-
-
1.7
ENST00000360467
7
ENSE00002184438
chr13:
111077081-111077215
135
CO4A2_HUMAN
61-105
45
0
-
-
1.8
ENST00000360467
8
ENSE00001468459
chr13:
111077300-111077344
45
CO4A2_HUMAN
106-120
15
0
-
-
1.9
ENST00000360467
9
ENSE00000917128
chr13:
111080814-111080930
117
CO4A2_HUMAN
121-159
39
0
-
-
1.10
ENST00000360467
10
ENSE00001468458
chr13:
111082232-111082303
72
CO4A2_HUMAN
160-183
24
0
-
-
1.11b
ENST00000360467
11b
ENSE00001468457
chr13:
111082748-111082783
36
CO4A2_HUMAN
184-195
12
0
-
-
1.12a
ENST00000360467
12a
ENSE00001468456
chr13:
111082892-111082954
63
CO4A2_HUMAN
196-216
21
0
-
-
1.13
ENST00000360467
13
ENSE00001468455
chr13:
111084672-111084707
36
CO4A2_HUMAN
217-228
12
0
-
-
1.14
ENST00000360467
14
ENSE00001468454
chr13:
111086748-111086789
42
CO4A2_HUMAN
229-242
14
0
-
-
1.15
ENST00000360467
15
ENSE00001468452
chr13:
111088616-111088714
99
CO4A2_HUMAN
243-275
33
0
-
-
1.16
ENST00000360467
16
ENSE00001468451
chr13:
111090349-111090384
36
CO4A2_HUMAN
276-287
12
0
-
-
1.17
ENST00000360467
17
ENSE00001468450
chr13:
111090965-111091015
51
CO4A2_HUMAN
288-304
17
0
-
-
1.18
ENST00000360467
18
ENSE00001468449
chr13:
111092136-111092180
45
CO4A2_HUMAN
305-319
15
0
-
-
1.19
ENST00000360467
19
ENSE00001468448
chr13:
111098176-111098229
54
CO4A2_HUMAN
320-337
18
0
-
-
1.20
ENST00000360467
20
ENSE00001468447
chr13:
111099145-111099211
67
CO4A2_HUMAN
338-360
23
0
-
-
1.21
ENST00000360467
21
ENSE00001411713
chr13:
111102026-111102136
111
CO4A2_HUMAN
360-397
38
0
-
-
1.22
ENST00000360467
22
ENSE00000917138
chr13:
111102652-111102801
150
CO4A2_HUMAN
397-447
51
0
-
-
1.23
ENST00000360467
23
ENSE00001468446
chr13:
111109690-111109782
93
CO4A2_HUMAN
447-478
32
0
-
-
1.24
ENST00000360467
24
ENSE00000940293
chr13:
111111118-111111281
164
CO4A2_HUMAN
478-532
55
0
-
-
1.25b
ENST00000360467
25b
ENSE00001468445
chr13:
111114461-111114533
73
CO4A2_HUMAN
533-557
25
0
-
-
1.26a
ENST00000360467
26a
ENSE00000940295
chr13:
111114625-111114731
107
CO4A2_HUMAN
557-592
36
0
-
-
1.27
ENST00000360467
27
ENSE00000854143
chr13:
111117752-111117953
202
CO4A2_HUMAN
593-660
68
0
-
-
1.28
ENST00000360467
28
ENSE00001468444
chr13:
111118350-111118409
60
CO4A2_HUMAN
660-680
21
0
-
-
1.29
ENST00000360467
29
ENSE00001468443
chr13:
111119387-111119443
57
CO4A2_HUMAN
680-699
20
0
-
-
1.30
ENST00000360467
30
ENSE00000917140
chr13:
111121564-111121671
108
CO4A2_HUMAN
699-735
37
0
-
-
1.31a
ENST00000360467
31a
ENSE00000940296
chr13:
111125276-111125497
222
CO4A2_HUMAN
735-809
75
0
-
-
1.33b
ENST00000360467
33b
ENSE00000917144
chr13:
111130350-111130511
162
CO4A2_HUMAN
809-863
55
0
-
-
1.34
ENST00000360467
34
ENSE00000917145
chr13:
111132567-111132737
171
CO4A2_HUMAN
863-920
58
0
-
-
1.35b
ENST00000360467
35b
ENSE00000940297
chr13:
111134863-111135006
144
CO4A2_HUMAN
920-968
49
0
-
-
1.36a
ENST00000360467
36a
ENSE00001468428
chr13:
111137252-111137374
123
CO4A2_HUMAN
968-1009
42
0
-
-
1.37b
ENST00000360467
37b
ENSE00000917147
chr13:
111138002-111138183
182
CO4A2_HUMAN
1009-1069
61
0
-
-
1.38
ENST00000360467
38
ENSE00001468438
chr13:
111141792-111141855
64
CO4A2_HUMAN
1070-1091
22
0
-
-
1.39
ENST00000360467
39
ENSE00000940300
chr13:
111142058-111142132
75
CO4A2_HUMAN
1091-1116
26
0
-
-
1.40
ENST00000360467
40
ENSE00001468437
chr13:
111143580-111143687
108
CO4A2_HUMAN
1116-1152
37
0
-
-
1.41
ENST00000360467
41
ENSE00001300860
chr13:
111144417-111144524
108
CO4A2_HUMAN
1152-1188
37
0
-
-
1.42
ENST00000360467
42
ENSE00001468435
chr13:
111145558-111145629
72
CO4A2_HUMAN
1188-1212
25
0
-
-
1.43
ENST00000360467
43
ENSE00000940304
chr13:
111147689-111147814
126
CO4A2_HUMAN
1212-1254
43
0
-
-
1.44
ENST00000360467
44
ENSE00001468434
chr13:
111154015-111154131
117
CO4A2_HUMAN
1254-1293
40
0
-
-
1.45
ENST00000360467
45
ENSE00000940306
chr13:
111155468-111155629
162
CO4A2_HUMAN
1293-1347
55
0
-
-
1.46
ENST00000360467
46
ENSE00000940307
chr13:
111155730-111155828
99
CO4A2_HUMAN
1347-1380
34
0
-
-
1.47
ENST00000360467
47
ENSE00001468433
chr13:
111156194-111156340
147
CO4A2_HUMAN
1380-1429
50
0
-
-
1.48
ENST00000360467
48
ENSE00001321025
chr13:
111156495-111156611
117
CO4A2_HUMAN
1429-1468
40
0
-
-
1.49a
ENST00000360467
49a
ENSE00000940310
chr13:
111158762-111158953
192
CO4A2_HUMAN
1468-1532
65
2
C:5-48
F:4-48
44
45
1.51a
ENST00000360467
51a
ENSE00000940311
chr13:
111160282-111160568
287
CO4A2_HUMAN
1532-1627
96
2
C:48-145 (gaps)
F:48-145 (gaps)
98
98
1.52b
ENST00000360467
52b
ENSE00001378931
chr13:
111164281-111165374
1094
CO4A2_HUMAN
1628-1712
85
2
C:146-229
F:146-229
85
85
2.1
ENST00000375820
1
ENSE00001468541
chr13:
110959496-110959291
206
CO4A1_HUMAN
1-28
28
0
-
-
2.2
ENST00000375820
2
ENSE00001388790
chr13:
110895081-110895022
60
CO4A1_HUMAN
29-48
20
0
-
-
2.3
ENST00000375820
3
ENSE00001371543
chr13:
110866362-110866273
90
CO4A1_HUMAN
49-78
30
0
-
-
2.4
ENST00000375820
4
ENSE00001381957
chr13:
110866173-110866129
45
CO4A1_HUMAN
79-93
15
0
-
-
2.5
ENST00000375820
5
ENSE00001369972
chr13:
110864965-110864921
45
CO4A1_HUMAN
94-108
15
0
-
-
2.6
ENST00000375820
6
ENSE00001379642
chr13:
110864826-110864764
63
CO4A1_HUMAN
109-129
21
0
-
-
2.7
ENST00000375820
7
ENSE00001371609
chr13:
110864269-110864216
54
CO4A1_HUMAN
130-147
18
0
-
-
2.8
ENST00000375820
8
ENSE00001368589
chr13:
110864020-110863994
27
CO4A1_HUMAN
148-156
9
0
-
-
2.9
ENST00000375820
9
ENSE00001378972
chr13:
110862559-110862476
84
CO4A1_HUMAN
157-184
28
0
-
-
2.10
ENST00000375820
10
ENSE00001372483
chr13:
110862389-110862327
63
CO4A1_HUMAN
185-205
21
0
-
-
2.11
ENST00000375820
11
ENSE00001374078
chr13:
110861774-110861739
36
CO4A1_HUMAN
206-217
12
0
-
-
2.12
ENST00000375820
12
ENSE00001385330
chr13:
110861237-110861196
42
CO4A1_HUMAN
218-231
14
0
-
-
2.13
ENST00000375820
13
ENSE00001387152
chr13:
110859836-110859750
87
CO4A1_HUMAN
232-260
29
0
-
-
2.14
ENST00000375820
14
ENSE00001367184
chr13:
110859238-110859212
27
CO4A1_HUMAN
261-269
9
0
-
-
2.15
ENST00000375820
15
ENSE00001384077
chr13:
110859062-110859012
51
CO4A1_HUMAN
270-286
17
0
-
-
2.16
ENST00000375820
16
ENSE00001380858
chr13:
110857885-110857841
45
CO4A1_HUMAN
287-301
15
0
-
-
2.17
ENST00000375820
17
ENSE00001365411
chr13:
110857753-110857700
54
CO4A1_HUMAN
302-319
18
0
-
-
2.18
ENST00000375820
18
ENSE00001382766
chr13:
110855954-110855913
42
CO4A1_HUMAN
320-333
14
0
-
-
2.19
ENST00000375820
19
ENSE00001375883
chr13:
110853869-110853785
85
CO4A1_HUMAN
334-362
29
0
-
-
2.20
ENST00000375820
20
ENSE00001366314
chr13:
110853236-110853201
36
CO4A1_HUMAN
362-374
13
0
-
-
2.21
ENST00000375820
21
ENSE00001384920
chr13:
110850978-110850814
165
CO4A1_HUMAN
374-429
56
0
-
-
2.22
ENST00000375820
22
ENSE00001368867
chr13:
110847465-110847370
96
CO4A1_HUMAN
429-461
33
0
-
-
2.23
ENST00000375820
23
ENSE00001377683
chr13:
110845260-110845177
84
CO4A1_HUMAN
461-489
29
0
-
-
2.24c
ENST00000375820
24c
ENSE00001383389
chr13:
110844631-110844561
71
CO4A1_HUMAN
489-512
24
0
-
-
2.25
ENST00000375820
25
ENSE00001351451
chr13:
110839676-110839485
192
CO4A1_HUMAN
513-576
64
0
-
-
2.26
ENST00000375820
26
ENSE00001368411
chr13:
110838900-110838732
169
CO4A1_HUMAN
577-633
57
0
-
-
2.27
ENST00000375820
27
ENSE00001372167
chr13:
110835623-110835531
93
CO4A1_HUMAN
633-664
32
0
-
-
2.28
ENST00000375820
28
ENSE00001383619
chr13:
110835444-110835340
105
CO4A1_HUMAN
664-699
36
0
-
-
2.29
ENST00000375820
29
ENSE00001377678
chr13:
110833736-110833639
98
CO4A1_HUMAN
699-731
33
0
-
-
2.30
ENST00000375820
30
ENSE00001367837
chr13:
110831768-110831618
151
CO4A1_HUMAN
732-782
51
0
-
-
2.31
ENST00000375820
31
ENSE00001369622
chr13:
110831383-110831270
114
CO4A1_HUMAN
782-820
39
0
-
-
2.32a
ENST00000375820
32a
ENSE00001380612
chr13:
110830578-110830411
168
CO4A1_HUMAN
820-876
57
0
-
-
2.33
ENST00000375820
33
ENSE00001386943
chr13:
110830278-110830189
90
CO4A1_HUMAN
876-906
31
0
-
-
2.34
ENST00000375820
34
ENSE00001390718
chr13:
110829384-110829232
153
CO4A1_HUMAN
906-957
52
0
-
-
2.35
ENST00000375820
35
ENSE00001366386
chr13:
110829071-110828973
99
CO4A1_HUMAN
957-990
34
0
-
-
2.36
ENST00000375820
36
ENSE00001375462
chr13:
110828860-110828771
90
CO4A1_HUMAN
990-1020
31
0
-
-
2.37
ENST00000375820
37
ENSE00001386278
chr13:
110827704-110827565
140
CO4A1_HUMAN
1020-1066
47
0
-
-
2.38
ENST00000375820
38
ENSE00001388916
chr13:
110827096-110826970
127
CO4A1_HUMAN
1067-1109
43
0
-
-
2.39
ENST00000375820
39
ENSE00001373789
chr13:
110826873-110826793
81
CO4A1_HUMAN
1109-1136
28
0
-
-
2.40
ENST00000375820
40
ENSE00001387730
chr13:
110826345-110826247
99
CO4A1_HUMAN
1136-1169
34
0
-
-
2.41
ENST00000375820
41
ENSE00001381072
chr13:
110825117-110825067
51
CO4A1_HUMAN
1169-1186
18
0
-
-
2.42
ENST00000375820
42
ENSE00001366193
chr13:
110823079-110822894
186
CO4A1_HUMAN
1186-1248
63
0
-
-
2.43
ENST00000375820
43
ENSE00001374535
chr13:
110822109-110821976
134
CO4A1_HUMAN
1248-1292
45
0
-
-
2.44
ENST00000375820
44
ENSE00001379606
chr13:
110819577-110819505
73
CO4A1_HUMAN
1293-1317
25
0
-
-
2.45
ENST00000375820
45
ENSE00001366657
chr13:
110818650-110818579
72
CO4A1_HUMAN
1317-1341
25
0
-
-
2.46
ENST00000375820
46
ENSE00001367416
chr13:
110817337-110817209
129
CO4A1_HUMAN
1341-1384
44
0
-
-
2.47a
ENST00000375820
47a
ENSE00001380684
chr13:
110815908-110815810
99
CO4A1_HUMAN
1384-1417
34
0
-
-
2.48a
ENST00000375820
48a
ENSE00001384242
chr13:
110814789-110814577
213
CO4A1_HUMAN
1417-1488
72
4
A:2-48
B:3-48
D:2-48
E:3-48
47
46
47
46
2.49a
ENST00000375820
49a
ENSE00001391003
chr13:
110813716-110813539
178
CO4A1_HUMAN
1488-1547
60
4
A:48-107
B:48-107
D:48-107
E:48-107
60
60
60
60
2.50
ENST00000375820
50
ENSE00001365839
chr13:
110807744-110807630
115
CO4A1_HUMAN
1547-1585
39
4
A:107-145
B:107-145
D:107-145
E:107-145
39
39
39
39
2.51
ENST00000375820
51
ENSE00001373536
chr13:
110804853-110804681
173
CO4A1_HUMAN
1586-1643
58
4
A:146-203
B:146-203
D:146-203
E:146-203
58
58
58
58
2.52b
ENST00000375820
52b
ENSE00001468488
chr13:
110802791-110801318
1474
CO4A1_HUMAN
1643-1669
27
4
A:203-229
B:203-229
D:203-229
E:203-229
27
27
27
27
[
close EXON info
]
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d1li1a1 (A:2-114)
1b: SCOP_d1li1a2 (A:115-229)
1c: SCOP_d1li1f1 (F:4-114)
1d: SCOP_d1li1f2 (F:115-229)
1e: SCOP_d1li1b1 (B:3-114)
1f: SCOP_d1li1b2 (B:115-229)
1g: SCOP_d1li1c1 (C:5-114)
1h: SCOP_d1li1c2 (C:115-229)
1i: SCOP_d1li1d1 (D:2-114)
1j: SCOP_d1li1d2 (D:115-229)
1k: SCOP_d1li1e1 (E:3-114)
1l: SCOP_d1li1e2 (E:115-229)
View:
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)
(
)
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(
)
(
)
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(
)
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)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
C-type lectin-like
(322)
Superfamily
:
C-type lectin-like
(322)
Family
:
Noncollagenous (NC1) domain of collagen IV
(4)
Protein domain
:
Noncollagenous (NC1) domain of collagen IV
(4)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1li1a1
A:2-114
1b
d1li1a2
A:115-229
1c
d1li1f1
F:4-114
1d
d1li1f2
F:115-229
1e
d1li1b1
B:3-114
1f
d1li1b2
B:115-229
1g
d1li1c1
C:5-114
1h
d1li1c2
C:115-229
1i
d1li1d1
D:2-114
1j
d1li1d2
D:115-229
1k
d1li1e1
E:3-114
1l
d1li1e2
E:115-229
[
close SCOP info
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1li1B00 (B:3-229)
1b: CATH_1li1E00 (E:3-229)
1c: CATH_1li1A00 (A:2-229)
1d: CATH_1li1D00 (D:2-229)
1e: CATH_1li1C00 (C:5-229)
1f: CATH_1li1F00 (F:4-229)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Complex
(381)
Topology
:
Noncollagenous (NC1) domain of collagen IV
(4)
Homologous Superfamily
:
Noncollagenous (NC1) domain of collagen IV
(4)
Human (Homo sapiens)
(1)
1a
1li1B00
B:3-229
1b
1li1E00
E:3-229
1c
1li1A00
A:2-229
1d
1li1D00
D:2-229
1e
1li1C00
C:5-229
1f
1li1F00
F:4-229
[
close CATH info
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_C4_1li1E01 (E:115-228)
1b: PFAM_C4_1li1E02 (E:115-228)
1c: PFAM_C4_1li1E03 (E:115-228)
1d: PFAM_C4_1li1E04 (E:115-228)
1e: PFAM_C4_1li1E05 (E:115-228)
1f: PFAM_C4_1li1E06 (E:115-228)
1g: PFAM_C4_1li1E07 (E:115-228)
1h: PFAM_C4_1li1E08 (E:115-228)
1i: PFAM_C4_1li1F01 (F:115-228)
1j: PFAM_C4_1li1F02 (F:115-228)
1k: PFAM_C4_1li1F03 (F:115-228)
1l: PFAM_C4_1li1F04 (F:115-228)
View:
Select:
Label:
Clans
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)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
C_Lectin
(98)
Family
:
C4
(3)
Homo sapiens (Human)
(1)
1a
C4-1li1E01
E:115-228
1b
C4-1li1E02
E:115-228
1c
C4-1li1E03
E:115-228
1d
C4-1li1E04
E:115-228
1e
C4-1li1E05
E:115-228
1f
C4-1li1E06
E:115-228
1g
C4-1li1E07
E:115-228
1h
C4-1li1E08
E:115-228
1i
C4-1li1F01
F:115-228
1j
C4-1li1F02
F:115-228
1k
C4-1li1F03
F:115-228
1l
C4-1li1F04
F:115-228
[
close Pfam info
]
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