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(1)
Title
:
THEORETICAL STRUCTURE OF HUMAN CYCLIN-DEPENDENT KINASE 4 (CDK4)
Authors
:
K. Narayana, R. P. K. Surendra, J. A. R. P. Sarma
Date
:
08 Apr 02 (Deposition) - 17 Apr 02 (Release) - 17 Apr 02 (Revision)
Method
:
THEORETICAL MODEL
Resolution
:
NOT APPLICABLE
Chains
:
Theor. Model : A
Keywords
:
Transferase, Serine/Threonine-Protein Kinase, Atp-Binding, Cell Cycle, Cell Division, Mitosis, Nuclear Protein, Phosphorylation, Proto-Oncogene
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Narayana, R. P. K. Surendra, J. A. R. P. Sarma
Theoretical Structure Of Human Cyclin-Dependent Kinase 4 (Cdk4)
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_006200 (R24C, chain A, )
2: VAR_006201 (R24H, chain A, )
3: VAR_021152 (N41S, chain A, )
4: VAR_029153 (R82Q, chain A, )
5: VAR_041976 (R122H, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_006200
R
24
C
CDK4_HUMAN
Disease (CMM3)
11547328
A
R
24
C
2
UniProt
VAR_006201
R
24
H
CDK4_HUMAN
Disease (CMM3)
---
A
R
24
H
3
UniProt
VAR_021152
N
41
S
CDK4_HUMAN
Disease (CMM3)
---
A
N
41
S
4
UniProt
VAR_029153
R
82
Q
CDK4_HUMAN
Polymorphism
3211612
A
R
82
Q
5
UniProt
VAR_041976
R
122
H
CDK4_HUMAN
Polymorphism
34386532
A
R
122
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:12-35)
2: PROTEIN_KINASE_ST (A:136-148)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
CDK4_HUMAN
12-35
1
A:12-35
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
CDK4_HUMAN
136-148
1
A:136-148
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Exons
(7, 7)
Info
All Exons
Exon 1.2 (A:1-73)
Exon 1.3b (A:73-118)
Exon 1.4 (A:119-174)
Exon 1.5a (A:175-211)
Exon 1.6 (A:211-228)
Exon 1.7 (A:228-273)
Exon 1.8b (A:274-303)
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All Exon Boundaries
1: Boundary 1.1a/1.2
2: Boundary 1.2/1.3b
3: Boundary 1.3b/1.4
4: Boundary 1.4/1.5a
5: Boundary 1.5a/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/1.8b
8: Boundary 1.8b/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000257904
1a
ENSE00001354290
chr12:
58146164-58145958
207
CDK4_HUMAN
-
0
0
-
-
1.2
ENST00000257904
2
ENSE00001386813
chr12:
58145519-58145283
237
CDK4_HUMAN
1-73
73
1
A:1-73
73
1.3b
ENST00000257904
3b
ENSE00000920441
chr12:
58145125-58144990
136
CDK4_HUMAN
73-118
46
1
A:73-118
46
1.4
ENST00000257904
4
ENSE00000920442
chr12:
58144873-58144706
168
CDK4_HUMAN
119-174
56
1
A:119-174
56
1.5a
ENST00000257904
5a
ENSE00001651755
chr12:
58144548-58144439
110
CDK4_HUMAN
175-211
37
1
A:175-211
37
1.6
ENST00000257904
6
ENSE00001796462
chr12:
58143287-58143237
51
CDK4_HUMAN
211-228
18
1
A:211-228
18
1.7
ENST00000257904
7
ENSE00001635558
chr12:
58143100-58142965
136
CDK4_HUMAN
228-273
46
1
A:228-273
46
1.8b
ENST00000257904
8b
ENSE00001141069
chr12:
58142400-58142005
396
CDK4_HUMAN
274-303
30
1
A:274-303
30
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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