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1L3E
Asym. Unit
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Asym.Unit (637 KB)
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Models
(17 )
Title
:
NMR STRUCTURES OF THE HIF-1ALPHA CTAD/P300 CH1 COMPLEX
Authors
:
S. J. Freedman, Z. J. Sun, F. Poy, A. L. Kung, D. M. Livingston, G. Wagner, M. J. Eck
Date
:
26 Feb 02 (Deposition) - 24 Apr 02 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (17 x)
Keywords
:
Protein-Protein Complex, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
S. J. Freedman, Z. Y. Sun, F. Poy, A. L. Kung, D. M. Livingston, G. Wagner, M. J. Eck
Structural Basis For Recruitment Of Cbp/P300 By Hypoxia-Inducible Factor-1 Alpha.
Proc. Natl. Acad. Sci. Usa V. 99 5367 2002
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ZN
3
Ligand/Ion
ZINC ION
[
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: ZN1 (AUTHOR)
5: ZN2 (AUTHOR)
6: ZN3 (AUTHOR)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS B:125 , CYS B:129 , CYS B:142 , CYS B:147
BINDING SITE FOR RESIDUE ZN B 202
2
AC2
SOFTWARE
HIS B:156 , CYS B:160 , CYS B:166 , CYS B:171
BINDING SITE FOR RESIDUE ZN B 203
3
AC3
SOFTWARE
HIS B:180 , CYS B:184 , CYS B:189 , CYS B:192
BINDING SITE FOR RESIDUE ZN B 204
4
ZN1
AUTHOR
HIS B:125 , CYS B:129 , CYS B:142 , CYS B:147
ZINC COORDINATE SITE 1
5
ZN2
AUTHOR
HIS B:156 , CYS B:160 , CYS B:166 , CYS B:171
ZINC COORDINATE SITE 2
6
ZN3
AUTHOR
HIS B:180 , CYS B:184 , CYS B:189 , CYS B:192
ZINC COORDINATE SITE 3
[
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_015854 (T12A, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_015854
T
796
A
HIF1A_HUMAN
Polymorphism
1802821
A
T
12
A
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZF_TAZ (B:109-195|-)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZF_TAZ
PS50134
Zinc finger TAZ-type profile.
EP300_HUMAN
331-417
1728-1809
1
B:109-195
-
[
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Exons
(3, 3)
Info
All Exons
Exon 1.4 (B:101-168)
Exon 1.5 (B:168-201)
Exon 2.15 (A:1-42 (gaps))
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/1.5
3: Boundary 1.5/1.6
4: Boundary 2.14/2.15
5: Boundary 2.15/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000263253
1
ENSE00001343011
chr22:
41487790-41489102
1313
EP300_HUMAN
1-32
32
0
-
-
1.2
ENST00000263253
2
ENSE00000654991
chr22:
41513191-41513825
635
EP300_HUMAN
32-243
212
0
-
-
1.3
ENST00000263253
3
ENSE00000655017
chr22:
41521868-41522044
177
EP300_HUMAN
244-302
59
0
-
-
1.4
ENST00000263253
4
ENSE00000655023
chr22:
41523491-41523752
262
EP300_HUMAN
303-390
88
1
B:101-168
68
1.5
ENST00000263253
5
ENSE00000655024
chr22:
41525894-41526007
114
EP300_HUMAN
390-428
39
1
B:168-201
34
1.6
ENST00000263253
6
ENSE00001336414
chr22:
41527392-41527637
246
EP300_HUMAN
428-510
83
0
-
-
1.7
ENST00000263253
7
ENSE00000655043
chr22:
41531817-41531910
94
EP300_HUMAN
510-541
32
0
-
-
1.8
ENST00000263253
8
ENSE00000655048
chr22:
41533657-41533794
138
EP300_HUMAN
541-587
47
0
-
-
1.9
ENST00000263253
9
ENSE00000655049
chr22:
41536144-41536261
118
EP300_HUMAN
587-626
40
0
-
-
1.10
ENST00000263253
10
ENSE00000655078
chr22:
41537052-41537226
175
EP300_HUMAN
627-685
59
0
-
-
1.11
ENST00000263253
11
ENSE00000655093
chr22:
41542743-41542820
78
EP300_HUMAN
685-711
27
0
-
-
1.12
ENST00000263253
12
ENSE00000655110
chr22:
41543841-41543950
110
EP300_HUMAN
711-747
37
0
-
-
1.13
ENST00000263253
13
ENSE00001336303
chr22:
41545042-41545179
138
EP300_HUMAN
748-793
46
0
-
-
1.14
ENST00000263253
14
ENSE00000655148
chr22:
41545765-41546202
438
EP300_HUMAN
794-939
146
0
-
-
1.15
ENST00000263253
15
ENSE00000880436
chr22:
41547837-41548016
180
EP300_HUMAN
940-999
60
0
-
-
1.16
ENST00000263253
16
ENSE00000880437
chr22:
41548210-41548354
145
EP300_HUMAN
1000-1048
49
0
-
-
1.17
ENST00000263253
17
ENSE00000880438
chr22:
41550999-41551117
119
EP300_HUMAN
1048-1087
40
0
-
-
1.18
ENST00000263253
18
ENSE00000655228
chr22:
41553173-41553412
240
EP300_HUMAN
1088-1167
80
0
-
-
1.19
ENST00000263253
19
ENSE00000655266
chr22:
41554416-41554504
89
EP300_HUMAN
1168-1197
30
0
-
-
1.20
ENST00000263253
20
ENSE00001302097
chr22:
41556646-41556726
81
EP300_HUMAN
1197-1224
28
0
-
-
1.21
ENST00000263253
21
ENSE00000655295
chr22:
41558727-41558783
57
EP300_HUMAN
1224-1243
20
0
-
-
1.22
ENST00000263253
22
ENSE00001307142
chr22:
41560057-41560134
78
EP300_HUMAN
1243-1269
27
0
-
-
1.23
ENST00000263253
23
ENSE00000655323
chr22:
41562603-41562670
68
EP300_HUMAN
1269-1292
24
0
-
-
1.24
ENST00000263253
24
ENSE00000655331
chr22:
41564453-41564603
151
EP300_HUMAN
1292-1342
51
0
-
-
1.25
ENST00000263253
25
ENSE00000655352
chr22:
41564725-41564871
147
EP300_HUMAN
1342-1391
50
0
-
-
1.26
ENST00000263253
26
ENSE00001730907
chr22:
41565507-41565620
114
EP300_HUMAN
1391-1429
39
0
-
-
1.27
ENST00000263253
27
ENSE00000655374
chr22:
41566410-41566575
166
EP300_HUMAN
1429-1484
56
0
-
-
1.28
ENST00000263253
28
ENSE00000655406
chr22:
41568503-41568667
165
EP300_HUMAN
1485-1539
55
0
-
-
1.29
ENST00000263253
29
ENSE00000655428
chr22:
41569627-41569788
162
EP300_HUMAN
1540-1593
54
0
-
-
1.30
ENST00000263253
30
ENSE00000655442
chr22:
41572251-41572532
282
EP300_HUMAN
1594-1687
94
0
-
-
1.31
ENST00000263253
31
ENSE00001177198
chr22:
41572777-41576081
3305
EP300_HUMAN
1688-2414
727
0
-
-
2.1a
ENST00000337138
1a
ENSE00001520256
chr14:
62162258-62162557
300
HIF1A_HUMAN
1-12
12
0
-
-
2.2b
ENST00000337138
2b
ENSE00000867524
chr14:
62187100-62187290
191
HIF1A_HUMAN
12-76
65
0
-
-
2.3
ENST00000337138
3
ENSE00000658281
chr14:
62188227-62188372
146
HIF1A_HUMAN
76-124
49
0
-
-
2.4
ENST00000337138
4
ENSE00000658282
chr14:
62188457-62188541
85
HIF1A_HUMAN
125-153
29
0
-
-
2.5
ENST00000337138
5
ENSE00000658283
chr14:
62193424-62193536
113
HIF1A_HUMAN
153-190
38
0
-
-
2.6
ENST00000337138
6
ENSE00000658284
chr14:
62194171-62194373
203
HIF1A_HUMAN
191-258
68
0
-
-
2.7
ENST00000337138
7
ENSE00000658285
chr14:
62199136-62199242
107
HIF1A_HUMAN
258-294
37
0
-
-
2.8
ENST00000337138
8
ENSE00000658286
chr14:
62200856-62201003
148
HIF1A_HUMAN
294-343
50
0
-
-
2.9
ENST00000337138
9
ENSE00000658287
chr14:
62203607-62203827
221
HIF1A_HUMAN
343-417
75
0
-
-
2.10
ENST00000337138
10
ENSE00000658289
chr14:
62204805-62205091
287
HIF1A_HUMAN
417-512
96
0
-
-
2.11
ENST00000337138
11
ENSE00000658291
chr14:
62207223-62207345
123
HIF1A_HUMAN
513-553
41
0
-
-
2.12
ENST00000337138
12
ENSE00000658293
chr14:
62207473-62207906
434
HIF1A_HUMAN
554-698
145
0
-
-
2.13
ENST00000337138
13
ENSE00000658295
chr14:
62211423-62211531
109
HIF1A_HUMAN
698-734
37
0
-
-
2.14
ENST00000337138
14
ENSE00000658297
chr14:
62212409-62212535
127
HIF1A_HUMAN
735-777
43
0
-
-
2.15
ENST00000337138
15
ENSE00001660793
chr14:
62213652-62214976
1325
HIF1A_HUMAN
777-826
50
1
A:1-42 (gaps)
43
[
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1l3ea_ (A:)
2a: SCOP_d1l3eb_ (B:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Peptides
(792)
Fold
:
Transactivation domain
(6)
Superfamily
:
Transactivation domain
(6)
Family
:
Transactivation domain
(6)
Protein domain
:
C-terminal activation domain (CTAD) of HIF-1alpha
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1l3ea_
A:
Class
:
Small proteins
(3458)
Fold
:
TAZ domain
(11)
Superfamily
:
TAZ domain
(11)
Family
:
TAZ domain
(11)
Protein domain
:
CREB-binding transcriptional adaptor protein CBP (p300)
(9)
Human (Homo sapiens) [TaxId: 9606]
(3)
2a
d1l3eb_
B:
[
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1l3eB00 (B:101-201)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
CREB-binding Protein; Chain A
(10)
Homologous Superfamily
:
CREB-binding Protein; Chain A
(10)
Human (Homo sapiens)
(5)
1a
1l3eB00
B:101-201
[
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_HIF_1a_CTAD_1l3eA01 (A:3-42)
2a: PFAM_zf_TAZ_1l3eB01 (B:114-194)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: HIF-1a_CTAD]
(2)
Family
:
HIF-1a_CTAD
(2)
Homo sapiens (Human)
(2)
1a
HIF-1a_CTAD-1l3eA01
A:3-42
Clan
:
no clan defined [family: zf-TAZ]
(13)
Family
:
zf-TAZ
(13)
Homo sapiens (Human)
(8)
2a
zf-TAZ-1l3eB01
B:114-194
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