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1L1R
Biol. Unit 1
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Asym.Unit (35 KB)
Biol.Unit 1 (60 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF APRTASE FROM GIARDIA LAMBLIA COMPLEXED WITH 9-DEAZAADENINE, MG2+ AND PRPP
Authors
:
W. Shi, A. E. Sarver, C. C. Wang, K. S. Tanaka, S. C. Almo, V. L. Schramm
Date
:
19 Feb 02 (Deposition) - 27 Nov 02 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Aprtase, Adenine, Giardia Lamblia, Purine Metabolism, Catalytic Loop, Transferase
(Keyword Search:
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]
)
Reference
:
W. Shi, A. E. Sarver, C. C. Wang, K. S. Tanaka, S. C. Almo, V. L. Schramm
Closed Site Complexes Of Adenine Phosphoribosyltransferase From Giardia Lamblia Reveal A Mechanism Of Ribosyl Migration.
J. Biol. Chem. V. 277 39981 2002
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: 9-DEAZAADENINE (9DAa)
2a: MAGNESIUM ION (MGa)
3a: ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC... (PRPa)
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No.
Name
Count
Type
Full Name
1
9DA
2
Ligand/Ion
9-DEAZAADENINE
2
MG
-1
Ligand/Ion
MAGNESIUM ION
3
PRP
2
Ligand/Ion
ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
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Description
1
AC1
SOFTWARE
GLU A:61 , PRP A:301 , HOH A:463 , HOH A:464
BINDING SITE FOR RESIDUE MG A 400
2
AC2
SOFTWARE
ALA A:24 , PHE A:25 , LYS A:26 , ARG A:63 , GLU A:100 , TYR A:101 , PRP A:301
BINDING SITE FOR RESIDUE 9DA A 201
3
AC3
SOFTWARE
SER A:62 , ARG A:63 , ARG A:83 , MET A:99 , GLU A:100 , TYR A:101 , ASP A:124 , ASP A:125 , VAL A:126 , ALA A:128 , THR A:129 , GLY A:130 , GLY A:131 , THR A:132 , 9DA A:201 , MG A:400 , HOH A:422 , HOH A:464 , HOH A:479 , HOH A:480
BINDING SITE FOR RESIDUE PRP A 301
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SCOP Domains
(1, 1)
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1a: SCOP_d1l1ra_ (A:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
Phosphoribosyltransferases (PRTases)
(100)
Protein domain
:
Adenine PRTase
(13)
Giardia intestinalis [TaxId: 5741]
(2)
1a
d1l1ra_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1l1rA00 (A:2-180)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.2020, no name defined]
(117)
Giardia intestinalis. Organism_taxid: 5741.
(4)
1a
1l1rA00
A:2-180
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_Pribosyltran_1l1rA01 (A:29-156)
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Clan
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PRTase-like
(59)
Family
:
Pribosyltran
(59)
Giardia intestinalis (Giardia lamblia)
(2)
1a
Pribosyltran-1l1rA01
A:29-156
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