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1KYD
Asym. Unit
Info
Asym.Unit (49 KB)
Biol.Unit 1 (45 KB)
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(1)
Title
:
AP-2 CLATHRIN ADAPTOR ALPHA-APPENDAGE IN COMPLEX WITH EPSIN DPW PEPTIDE
Authors
:
T. J. Brett, L. M. Traub, D. H. Fremont
Date
:
04 Feb 02 (Deposition) - 12 Jun 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,P
Biol. Unit 1: A,P (1x)
Keywords
:
Protein-Peptide Complex, Endocytosis, Endocytosis/Exocytosis Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. J. Brett, L. M. Traub, D. H. Fremont
Accessory Protein Recruitment Motifs In Clathrin-Mediated Endocytosis.
Structure V. 10 797 2002
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
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Select:
Label:
No.
Name
Count
Type
Full Name
1
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:177 , ASP A:761 , LEU A:762 , ASN A:765 , PHE A:795 , THR A:796 , GLU A:797
BINDING SITE FOR RESIDUE SO4 A 200
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
Sorry, no Info available
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Exons
(1, 1)
Info
All Exons
Exon 1.10 (P:341-345 (gaps))
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All Exon Boundaries
1: Boundary 1.9/1.10
2: Boundary 1.10/1.11a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000270460
1
ENSE00001178639
chr19:
56186561-56186801
241
EPN1_HUMAN
-
0
0
-
-
1.4
ENST00000270460
4
ENSE00001671302
chr19:
56189893-56190221
329
EPN1_HUMAN
1-76
76
0
-
-
1.5
ENST00000270460
5
ENSE00000728185
chr19:
56196762-56197011
250
EPN1_HUMAN
77-160
84
0
-
-
1.6
ENST00000270460
6
ENSE00000728191
chr19:
56200236-56200360
125
EPN1_HUMAN
160-201
42
0
-
-
1.7
ENST00000270460
7
ENSE00000953972
chr19:
56200663-56200737
75
EPN1_HUMAN
202-226
25
0
-
-
1.8
ENST00000270460
8
ENSE00000728194
chr19:
56201233-56201316
84
EPN1_HUMAN
227-254
28
0
-
-
1.9
ENST00000270460
9
ENSE00000728198
chr19:
56203120-56203423
304
EPN1_HUMAN
255-356
102
0
-
-
1.10
ENST00000270460
10
ENSE00000728203
chr19:
56204052-56204162
111
EPN1_HUMAN
356-393
38
1
P:341-345 (gaps)
10
1.11a
ENST00000270460
11a
ENSE00000892889
chr19:
56204317-56204403
87
EPN1_HUMAN
393-422
30
0
-
-
1.12
ENST00000270460
12
ENSE00000728216
chr19:
56206092-56206349
258
EPN1_HUMAN
422-508
87
0
-
-
1.13
ENST00000270460
13
ENSE00001354396
chr19:
56206514-56207132
619
EPN1_HUMAN
508-576
69
0
-
-
[
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1kyda1 (A:692-824)
2a: SCOP_d1kyda2 (A:825-938)
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(
)
(
)
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)
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)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Clathrin adaptor appendage domain
(28)
Family
:
Alpha-adaptin ear subdomain-like
(14)
Protein domain
:
Alpha-adaptin AP2 ear domain, N-terminal subdomain
(10)
Mouse (Mus musculus) [TaxId: 10090]
(10)
1a
d1kyda1
A:692-824
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Subdomain of clathrin and coatomer appendage domain
(16)
Superfamily
:
Subdomain of clathrin and coatomer appendage domain
(16)
Family
:
Clathrin adaptor appendage, alpha and beta chain-specific domain
(14)
Protein domain
:
Alpa-adaptin AP2, C-terminal subdomain
(10)
Mouse (Mus musculus) [TaxId: 10090]
(10)
2a
d1kyda2
A:825-938
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1kydA02 (A:826-938)
2a: CATH_1kydA01 (A:692-825)
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(
)
(
)
Architectures
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
TATA-Binding Protein
(118)
Homologous Superfamily
:
[code=3.30.310.30, no name defined]
(13)
House mouse (Mus musculus)
(8)
1a
1kydA02
A:826-938
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.1030, no name defined]
(11)
House mouse (Mus musculus)
(8)
2a
1kydA01
A:692-825
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Alpha_adaptinC2_1kydA01 (A:712-819)
2a: PFAM_Alpha_adaptin_C_1kydA02 (A:825-933)
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Clan
:
E-set
(290)
Family
:
Alpha_adaptinC2
(13)
Mus musculus (Mouse)
(9)
1a
Alpha_adaptinC2-1kydA01
A:712-819
Clan
:
no clan defined [family: Alpha_adaptin_C]
(9)
Family
:
Alpha_adaptin_C
(9)
Mus musculus (Mouse)
(9)
2a
Alpha_adaptin_C-1kydA02
A:825-933
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Asymmetric Unit 1
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Asym.Unit (49 KB)
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