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1KMT
Asym. Unit
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Asym.Unit (159 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (78 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RHOGDI GLU(154,155)ALA MUTANT
Authors
:
A. Mateja, Y. Devedjiev, D. Krowarsh, K. Longenecker, Z. Dauter, J. Otlewski, Z. S. Derewenda
Date
:
17 Dec 01 (Deposition) - 11 Dec 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Immunoglobulin Fold, Beta Sandwich Motif, Isoprenyl-Binding, Protein Binding
(Keyword Search:
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Reference
:
A. Mateja, Y. Devedjiev, D. Krowarsch, K. Longenecker, Z. Dauter, J. Otlewski, Z. S. Derewenda
The Impact Of Glu-->Ala And Glu-->Asp Mutations On The Crystallization Properties Of Rhogdi: The Structure Of Rhogdi At 1. 3 A Resolution.
Acta Crystallogr. , Sect. D V. 58 1983 2002
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(4, 8)
Info
All Exons
Exon 1.3 (A:65-92 | B:65-92)
Exon 1.4 (A:92-117 | B:92-117)
Exon 1.5 (A:118-139 | B:118-139)
Exon 1.6b (A:139-202 | B:139-202)
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1: Boundary 1.2/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
4: Boundary 1.5/1.6b
5: Boundary 1.6b/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000269321
1a
ENSE00001297309
chr17:
79829238-79829174
65
GDIR1_HUMAN
-
0
0
-
-
1.2
ENST00000269321
2
ENSE00000949422
chr17:
79827833-79827617
217
GDIR1_HUMAN
1-64
64
0
-
-
1.3
ENST00000269321
3
ENSE00001293194
chr17:
79827501-79827418
84
GDIR1_HUMAN
64-92
29
2
A:65-92
B:65-92
28
28
1.4
ENST00000269321
4
ENSE00001745599
chr17:
79827282-79827206
77
GDIR1_HUMAN
92-117
26
2
A:92-117
B:92-117
26
26
1.5
ENST00000269321
5
ENSE00001617149
chr17:
79827112-79827049
64
GDIR1_HUMAN
118-139
22
2
A:118-139
B:118-139
22
22
1.6b
ENST00000269321
6b
ENSE00001370626
chr17:
79826951-79825598
1354
GDIR1_HUMAN
139-204
66
2
A:139-202
B:139-202
64
64
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SCOP Domains
(1, 2)
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1a: SCOP_d1kmta_ (A:)
1b: SCOP_d1kmtb_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
E set domains
(509)
Family
:
RhoGDI-like
(34)
Protein domain
:
Rho GDP-dissociation inhibitor 1, RhoGDI
(16)
Human (Homo sapiens) [TaxId: 9606]
(12)
1a
d1kmta_
A:
1b
d1kmtb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1kmtA00 (A:65-202)
1b: CATH_1kmtB00 (B:65-202)
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Class
:
Mainly Beta
(13760)
Architecture
:
Distorted Sandwich
(506)
Topology
:
Coagulation Factor XIII; Chain A, domain 1
(28)
Homologous Superfamily
:
Coagulation Factor XIII, subunit A, domain 1
(22)
Human (Homo sapiens)
(20)
1a
1kmtA00
A:65-202
1b
1kmtB00
B:65-202
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Rho_GDI_1kmtB01 (B:67-201)
1b: PFAM_Rho_GDI_1kmtB02 (B:67-201)
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Clan
:
no clan defined [family: Rho_GDI]
(12)
Family
:
Rho_GDI
(12)
Homo sapiens (Human)
(12)
1a
Rho_GDI-1kmtB01
B:67-201
1b
Rho_GDI-1kmtB02
B:67-201
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Asym.Unit (159 KB)
Header - Asym.Unit
Biol.Unit 1 (79 KB)
Header - Biol.Unit 1
Biol.Unit 2 (78 KB)
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