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1KJY
Asym. Unit
Info
Asym.Unit (128 KB)
Biol.Unit 1 (62 KB)
Biol.Unit 2 (62 KB)
Biol.Unit 3 (121 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN G[ALPHA]I1 BOUND TO THE GOLOCO MOTIF OF RGS14
Authors
:
R. J. Kimple, M. E. Kimple, L. Betts, J. Sondek, D. P. Siderovski
Date
:
05 Dec 01 (Deposition) - 08 May 02 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Protein-Peptide Complex, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. J. Kimple, M. E. Kimple, L. Betts, J. Sondek, D. P. Siderovski
Structural Determinants For Goloco-Induced Inhibition Of Nucleotide Release By Galpha Subunits.
Nature V. 416 878 2002
[
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Hetero Components
(3, 19)
Info
All Hetero Components
1a: CESIUM ION (CSa)
1b: CESIUM ION (CSb)
1c: CESIUM ION (CSc)
1d: CESIUM ION (CSd)
1e: CESIUM ION (CSe)
1f: CESIUM ION (CSf)
1g: CESIUM ION (CSg)
1h: CESIUM ION (CSh)
1i: CESIUM ION (CSi)
1j: CESIUM ION (CSj)
1k: CESIUM ION (CSk)
1l: CESIUM ION (CSl)
1m: CESIUM ION (CSm)
1n: CESIUM ION (CSn)
1o: CESIUM ION (CSo)
2a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
2b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CS
15
Ligand/Ion
CESIUM ION
2
GDP
2
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
3
MG
2
Ligand/Ion
MAGNESIUM ION
[
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GDP A:356 , SER B:510 , HIS B:513 , ARG B:516 , HOH B:4085
BINDING SITE FOR RESIDUE MG B 800
02
AC2
SOFTWARE
GDP C:355 , SER C:1047 , ASP C:1200
BINDING SITE FOR RESIDUE MG C 801
03
AC3
SOFTWARE
PHE C:1140 , SER C:1143
BINDING SITE FOR RESIDUE CS C 802
04
AC4
SOFTWARE
PHE A:140 , SER A:143
BINDING SITE FOR RESIDUE CS A 803
05
AC5
SOFTWARE
ASP A:158
BINDING SITE FOR RESIDUE CS A 804
06
AC6
SOFTWARE
HIS C:1057 , THR C:1190
BINDING SITE FOR RESIDUE CS C 805
07
AC7
SOFTWARE
ASN C:1157 , ASP C:1158
BINDING SITE FOR RESIDUE CS C 806
08
AC8
SOFTWARE
ASP D:1496
BINDING SITE FOR RESIDUE CS D 807
09
AC9
SOFTWARE
ALA A:59 , TYR A:61
BINDING SITE FOR RESIDUE CS A 808
10
BC1
SOFTWARE
LYS C:1092 , ASP C:1094
BINDING SITE FOR RESIDUE CS C 809
11
BC2
SOFTWARE
HIS A:188
BINDING SITE FOR RESIDUE CS A 811
12
BC3
SOFTWARE
HIS A:57 , THR A:190
BINDING SITE FOR RESIDUE CS A 812
13
BC4
SOFTWARE
GLU A:186
BINDING SITE FOR RESIDUE CS A 813
14
BC5
SOFTWARE
HIS C:1188
BINDING SITE FOR RESIDUE CS C 814
15
BC6
SOFTWARE
GLU C:1186 , HOH C:4001
BINDING SITE FOR RESIDUE CS C 815
16
BC7
SOFTWARE
PHE A:95 , GLY A:96
BINDING SITE FOR RESIDUE CS A 816
17
BC8
SOFTWARE
MG C:801 , GLY C:1042 , GLU C:1043 , SER C:1044 , GLY C:1045 , LYS C:1046 , SER C:1047 , THR C:1048 , SER C:1151 , ARG C:1176 , ARG C:1178 , ASN C:1269 , LYS C:1270 , ASP C:1272 , LEU C:1273 , CYS C:1325 , ALA C:1326 , THR C:1327 , HOH C:4178 , ARG D:1516
BINDING SITE FOR RESIDUE GDP C 355
18
BC9
SOFTWARE
GLY A:42 , GLU A:43 , SER A:44 , GLY A:45 , LYS A:46 , SER A:47 , THR A:48 , SER A:151 , ARG A:176 , ARG A:178 , ASN A:269 , LYS A:270 , ASP A:272 , LEU A:273 , CYS A:325 , ALA A:326 , THR A:327 , HOH A:4043 , ARG B:516 , MG B:800
BINDING SITE FOR RESIDUE GDP A 356
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: GOLOCO (B:497-519,D:1497-1519)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GOLOCO
PS50877
GoLoco/GPR motif profile.
RGS14_RAT
497-519
2
B:497-519
D:1497-1519
[
close PROSITE info
]
Exons
(10, 20)
Info
All Exons
Exon 1.15 (B:496-499 | D:1496-1499)
Exon 1.16 (B:499-530 | D:1499-1529)
Exon 2.4a (A:30-40 | C:1030-1040)
Exon 2.8 (A:40-54 | C:1040-1054)
Exon 2.9b (A:54-101 | C:1054-1101)
Exon 2.10 (A:102-154 | C:1102-1154)
Exon 2.11 (A:154-197 | C:1154-1197)
Exon 2.12 (A:197-240 | C:1197-1240)
Exon 2.13 (A:241-292 | C:1241-1292)
Exon 2.14b (A:292-349 | C:1292-1347)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.14/1.15
02: Boundary 1.15/1.16
03: Boundary 1.16/-
04: Boundary -/2.4a
05: Boundary 2.4a/2.8
06: Boundary 2.8/2.9b
07: Boundary 2.9b/2.10
08: Boundary 2.10/2.11
09: Boundary 2.11/2.12
10: Boundary 2.12/2.13
11: Boundary 2.13/2.14b
12: Boundary 2.14b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000021596
1
ENSRNOE00000151537
chr17:
15307162-15307078
85
RGS14_RAT
-
0
0
-
-
1.2
ENSRNOT00000021596
2
ENSRNOE00000151623
chr17:
15306886-15306663
224
RGS14_RAT
1-15
15
0
-
-
1.3
ENSRNOT00000021596
3
ENSRNOE00000151855
chr17:
15300174-15300153
22
RGS14_RAT
16-23
8
0
-
-
1.4
ENSRNOT00000021596
4
ENSRNOE00000152004
chr17:
15299923-15299745
179
RGS14_RAT
23-82
60
0
-
-
1.5
ENSRNOT00000021596
5
ENSRNOE00000152177
chr17:
15299433-15299341
93
RGS14_RAT
83-113
31
0
-
-
1.6
ENSRNOT00000021596
6
ENSRNOE00000152327
chr17:
15299257-15299114
144
RGS14_RAT
114-161
48
0
-
-
1.7
ENSRNOT00000021596
7
ENSRNOE00000152464
chr17:
15298815-15298672
144
RGS14_RAT
162-209
48
0
-
-
1.8
ENSRNOT00000021596
8
ENSRNOE00000152602
chr17:
15298543-15298441
103
RGS14_RAT
210-244
35
0
-
-
1.9
ENSRNOT00000021596
9
ENSRNOE00000152768
chr17:
15298160-15298048
113
RGS14_RAT
244-281
38
0
-
-
1.10
ENSRNOT00000021596
10
ENSRNOE00000152952
chr17:
15297289-15297086
204
RGS14_RAT
282-349
68
0
-
-
1.11
ENSRNOT00000021596
11
ENSRNOE00000150604
chr17:
15295354-15295278
77
RGS14_RAT
350-375
26
0
-
-
1.12
ENSRNOT00000021596
12
ENSRNOE00000153033
chr17:
15295080-15294954
127
RGS14_RAT
375-417
43
0
-
-
1.13
ENSRNOT00000021596
13
ENSRNOE00000153185
chr17:
15294862-15294781
82
RGS14_RAT
418-445
28
0
-
-
1.14
ENSRNOT00000021596
14
ENSRNOE00000150947
chr17:
15294672-15294626
47
RGS14_RAT
445-460
16
0
-
-
1.15
ENSRNOT00000021596
15
ENSRNOE00000151071
chr17:
15294544-15294430
115
RGS14_RAT
461-499
39
2
B:496-499
D:1496-1499
4
4
1.16
ENSRNOT00000021596
16
ENSRNOE00000153347
chr17:
15294197-15293100
1098
RGS14_RAT
499-544
46
2
B:499-530
D:1499-1529
32
31
2.4a
ENST00000351004
4a
ENSE00001371927
chr7:
79764104-79764594
491
GNAI1_HUMAN
1-40
40
2
A:30-40
C:1030-1040
11
11
2.8
ENST00000351004
8
ENSE00001626524
chr7:
79818267-79818309
43
GNAI1_HUMAN
40-54
15
2
A:40-54
C:1040-1054
15
15
2.9b
ENST00000351004
9b
ENSE00001129655
chr7:
79818406-79818547
142
GNAI1_HUMAN
54-101
48
2
A:54-101
C:1054-1101
48
48
2.10
ENST00000351004
10
ENSE00000877050
chr7:
79828541-79828698
158
GNAI1_HUMAN
102-154
53
2
A:102-154
C:1102-1154
53
53
2.11
ENST00000351004
11
ENSE00002174891
chr7:
79833020-79833148
129
GNAI1_HUMAN
154-197
44
2
A:154-197
C:1154-1197
44
44
2.12
ENST00000351004
12
ENSE00001369917
chr7:
79840285-79840414
130
GNAI1_HUMAN
197-240
44
2
A:197-240
C:1197-1240
44
44
2.13
ENST00000351004
13
ENSE00001591517
chr7:
79842032-79842185
154
GNAI1_HUMAN
241-292
52
2
A:241-292
C:1241-1292
52
52
2.14b
ENST00000351004
14b
ENSE00001303419
chr7:
79846619-79848718
2100
GNAI1_HUMAN
292-354
63
2
A:292-349
C:1292-1347
58
56
[
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1kjya1 (A:61-181)
1b: SCOP_d1kjyc1 (C:1061-1181)
2a: SCOP_d1kjya2 (A:30-60,A:182-349)
2b: SCOP_d1kjyc2 (C:1030-1060,C:1182-1347)
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Transducin (alpha subunit), insertion domain
(49)
Superfamily
:
Transducin (alpha subunit), insertion domain
(49)
Family
:
Transducin (alpha subunit), insertion domain
(49)
Protein domain
:
Transducin (alpha subunit), insertion domain
(49)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(19)
1a
d1kjya1
A:61-181
1b
d1kjyc1
C:1061-1181
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Transducin (alpha subunit)
(51)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(21)
2a
d1kjya2
A:30-60,A:182-349
2b
d1kjyc2
C:1030-1060,C:1182-1347
[
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1kjyA01 (A:34-61,A:181-343)
1b: CATH_1kjyC01 (C:1034-1061,C:1181-1343)
2a: CATH_1kjyA02 (A:62-180)
2b: CATH_1kjyC02 (C:1062-1180)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
1kjyA01
A:34-61,A:181-343
1b
1kjyC01
C:1034-1061,C:1181-1343
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
GI Alpha 1, domain 2-like
(67)
Homologous Superfamily
:
GI Alpha 1, domain 2-like
(66)
Human (Homo sapiens)
(13)
2a
1kjyA02
A:62-180
2b
1kjyC02
C:1062-1180
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain D
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