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Asym. Unit
Info
Asym.Unit (394 KB)
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Models
(20 )
Title
:
NMR SOLUTION STRUCTURE OF C5A AT PH 5.2, 303K, 20 STRUCTURES
Authors
:
X. Zhang, W. Boyar, M. Toth, L. Wennogle, N. C. Gonnella
Date
:
09 Jan 97 (Deposition) - 15 May 97 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Aggregation, Chemotaxis, Cell Adhesion, Gp Agonist, C5A Receptor Agonist
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Zhang, W. Boyar, M. J. Toth, L. Wennogle, N. C. Gonnella
Structural Definition Of The C5A C Terminus By Two-Dimensional Nuclear Magnetic Resonance Spectroscopy.
Proteins V. 28 261 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
Select:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 1)
Info
All PROSITE Patterns/Profiles
1: ANAPHYLATOXIN_1 (A:21-55)
2: ANAPHYLATOXIN_2 (A:21-55)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANAPHYLATOXIN_1
PS01177
Anaphylatoxin domain signature.
CO5_HUMAN
698-732
1
A:21-55
2
ANAPHYLATOXIN_2
PS01178
Anaphylatoxin domain profile.
CO5_HUMAN
698-732
1
A:21-55
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Exons
(2, 2)
Info
All Exons
Exon 1.18 (A:1-10)
Exon 1.19 (A:10-74)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.17/1.18
2: Boundary 1.18/1.19
3: Boundary 1.19/1.20
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000223642
2
ENSE00000806456
chr9:
123812554-123812460
95
CO5_HUMAN
1-22
22
0
-
-
1.3
ENST00000223642
3
ENSE00000724393
chr9:
123808661-123808469
193
CO5_HUMAN
22-86
65
0
-
-
1.4
ENST00000223642
4
ENSE00000724389
chr9:
123805444-123805282
163
CO5_HUMAN
87-141
55
0
-
-
1.5
ENST00000223642
5
ENSE00000724383
chr9:
123800229-123800159
71
CO5_HUMAN
141-164
24
0
-
-
1.6a
ENST00000223642
6a
ENSE00000724378
chr9:
123797172-123797081
92
CO5_HUMAN
165-195
31
0
-
-
1.7
ENST00000223642
7
ENSE00000724375
chr9:
123794473-123794391
83
CO5_HUMAN
195-223
29
0
-
-
1.8
ENST00000223642
8
ENSE00000724372
chr9:
123792765-123792675
91
CO5_HUMAN
223-253
31
0
-
-
1.9
ENST00000223642
9
ENSE00000724368
chr9:
123789552-123789438
115
CO5_HUMAN
253-291
39
0
-
-
1.11
ENST00000223642
11
ENSE00000724364
chr9:
123787858-123787732
127
CO5_HUMAN
292-334
43
0
-
-
1.12
ENST00000223642
12
ENSE00000806455
chr9:
123785797-123785682
116
CO5_HUMAN
334-372
39
0
-
-
1.13
ENST00000223642
13
ENSE00000724360
chr9:
123783972-123783787
186
CO5_HUMAN
373-434
62
0
-
-
1.14
ENST00000223642
14
ENSE00000724358
chr9:
123782457-123782254
204
CO5_HUMAN
435-502
68
0
-
-
1.15
ENST00000223642
15
ENSE00000724356
chr9:
123780130-123779921
210
CO5_HUMAN
503-572
70
0
-
-
1.16
ENST00000223642
16
ENSE00000724353
chr9:
123779789-123779640
150
CO5_HUMAN
573-622
50
0
-
-
1.17
ENST00000223642
17
ENSE00000724350
chr9:
123778661-123778532
130
CO5_HUMAN
623-666
44
0
-
-
1.18
ENST00000223642
18
ENSE00000724347
chr9:
123777539-123777477
63
CO5_HUMAN
666-687
22
1
A:1-10
10
1.19
ENST00000223642
19
ENSE00000724343
chr9:
123776348-123776151
198
CO5_HUMAN
687-753
67
1
A:10-74
65
1.20
ENST00000223642
20
ENSE00000724339
chr9:
123770776-123770686
91
CO5_HUMAN
753-783
31
0
-
-
1.21a
ENST00000223642
21a
ENSE00000724335
chr9:
123769255-123769182
74
CO5_HUMAN
783-808
26
0
-
-
1.22
ENST00000223642
22
ENSE00000724332
chr9:
123768336-123768197
140
CO5_HUMAN
808-854
47
0
-
-
1.24
ENST00000223642
24
ENSE00000724329
chr9:
123760052-123759825
228
CO5_HUMAN
855-930
76
0
-
-
1.25
ENST00000223642
25
ENSE00000724327
chr9:
123758578-123758518
61
CO5_HUMAN
931-951
21
0
-
-
1.26
ENST00000223642
26
ENSE00000724325
chr9:
123753558-123753469
90
CO5_HUMAN
951-981
31
0
-
-
1.27b
ENST00000223642
27b
ENSE00000724322
chr9:
123752058-123751846
213
CO5_HUMAN
981-1052
72
0
-
-
1.28
ENST00000223642
28
ENSE00000724320
chr9:
123751399-123751324
76
CO5_HUMAN
1052-1077
26
0
-
-
1.29
ENST00000223642
29
ENSE00000724317
chr9:
123745092-123744933
160
CO5_HUMAN
1077-1130
54
0
-
-
1.30a
ENST00000223642
30a
ENSE00000724315
chr9:
123744217-123744122
96
CO5_HUMAN
1131-1162
32
0
-
-
1.31
ENST00000223642
31
ENSE00000724313
chr9:
123742532-123742361
172
CO5_HUMAN
1163-1220
58
0
-
-
1.33
ENST00000223642
33
ENSE00000724312
chr9:
123739183-123738978
206
CO5_HUMAN
1220-1288
69
0
-
-
1.34
ENST00000223642
34
ENSE00000724311
chr9:
123737209-123737057
153
CO5_HUMAN
1289-1339
51
0
-
-
1.35
ENST00000223642
35
ENSE00000724308
chr9:
123734270-123734208
63
CO5_HUMAN
1340-1360
21
0
-
-
1.36
ENST00000223642
36
ENSE00000724304
chr9:
123732529-123732448
82
CO5_HUMAN
1361-1388
28
0
-
-
1.37
ENST00000223642
37
ENSE00000724301
chr9:
123731396-123731339
58
CO5_HUMAN
1388-1407
20
0
-
-
1.38
ENST00000223642
38
ENSE00000724299
chr9:
123726016-123725914
103
CO5_HUMAN
1407-1441
35
0
-
-
1.39
ENST00000223642
39
ENSE00000724298
chr9:
123725245-123725171
75
CO5_HUMAN
1442-1466
25
0
-
-
1.40a
ENST00000223642
40a
ENSE00000724295
chr9:
123725054-123724949
106
CO5_HUMAN
1467-1502
36
0
-
-
1.41
ENST00000223642
41
ENSE00000724292
chr9:
123723843-123723760
84
CO5_HUMAN
1502-1530
29
0
-
-
1.42
ENST00000223642
42
ENSE00000724291
chr9:
123722615-123722526
90
CO5_HUMAN
1530-1560
31
0
-
-
1.43a
ENST00000223642
43a
ENSE00000724290
chr9:
123719646-123719563
84
CO5_HUMAN
1560-1588
29
0
-
-
1.44
ENST00000223642
44
ENSE00000724289
chr9:
123716146-123716008
139
CO5_HUMAN
1588-1634
47
0
-
-
1.45
ENST00000223642
45
ENSE00000806454
chr9:
123715146-123714616
531
CO5_HUMAN
1634-1676
43
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1kjsa_ (A:)
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)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Anaphylotoxins (complement system)
(6)
Superfamily
:
Anaphylotoxins (complement system)
(6)
Family
:
Anaphylotoxins (complement system)
(6)
Protein domain
:
C5a anaphylotoxin
(5)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1kjsa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1kjsA00 (A:1-74)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Influenza Virus Matrix Protein; Chain A, domain 1
(6)
Homologous Superfamily
:
[code=1.20.91.20, no name defined]
(3)
Human (Homo sapiens)
(2)
1a
1kjsA00
A:1-74
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_ANATO_1kjsA01 (A:21-55)
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)
Clan
:
no clan defined [family: ANATO]
(5)
Family
:
ANATO
(5)
Homo sapiens (Human)
(5)
1a
ANATO-1kjsA01
A:21-55
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