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1KIU
Biol. Unit 1
Info
Asym.Unit (609 KB)
Biol.Unit 1 (84 KB)
Biol.Unit 10 (305 KB)
Biol.Unit 11 (305 KB)
Biol.Unit 2 (84 KB)
Biol.Unit 3 (84 KB)
Biol.Unit 4 (84 KB)
Biol.Unit 5 (82 KB)
Biol.Unit 6 (82 KB)
Biol.Unit 7 (83 KB)
Biol.Unit 8 (82 KB)
Biol.Unit 9 (305 KB)
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(1)
Title
:
FIMH ADHESIN Q133N MUTANT-FIMC CHAPERONE COMPLEX WITH METHYL-ALPHA-D-MANNOSE
Authors
:
C. S. Hung, J. Bouckaert
Date
:
03 Dec 01 (Deposition) - 05 Jun 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K,L (1x)
Biol. Unit 7: M,N (1x)
Biol. Unit 8: O,P (1x)
Biol. Unit 9: C,D,I,J (2x)
Biol. Unit 10: A,B,G,H,K,L,O,P (1x)
Biol. Unit 11: E,F,M,N (2x)
Keywords
:
Adhesin-Chaperone Complex, Mannose-Bound, Chaperone/Cell Adhesion Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. S. Hung, J. Bouckaert, D. Hung, J. Pinkner, C. Widberg, A. Defusco, C. G. Auguste, R. Strouse, S. Langermann, G. Waksman, S. J. Hultgren
Structural Basis Of Tropism Of Escherichia Coli To The Bladder During Urinary Tract Infection.
Mol. Microbiol. V. 44 903 2002
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 1)
Info
All Hetero Components
1a: O1-METHYL-MANNOSE (MMAa)
1b: O1-METHYL-MANNOSE (MMAb)
1c: O1-METHYL-MANNOSE (MMAc)
1d: O1-METHYL-MANNOSE (MMAd)
1e: O1-METHYL-MANNOSE (MMAe)
1f: O1-METHYL-MANNOSE (MMAf)
1g: O1-METHYL-MANNOSE (MMAg)
1h: O1-METHYL-MANNOSE (MMAh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MMA
1
Ligand/Ion
O1-METHYL-MANNOSE
[
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE B:1 , ILE B:13 , ASN B:46 , ASP B:47 , TYR B:48 , ILE B:52 , ASP B:54 , ASN B:133 , ASN B:135 , HOH B:515 , HOH B:536 , THR D:259
BINDING SITE FOR RESIDUE MMA B 500
2
AC3
SOFTWARE
THR B:259 , PHE F:1 , ILE F:13 , ASN F:46 , ASP F:47 , TYR F:48 , ILE F:52 , ASP F:54 , ASN F:135 , HOH F:506 , HOH F:523 , HOH F:531
BINDING SITE FOR RESIDUE MMA F 502
3
AC7
SOFTWARE
THR A:99 , PHE N:1 , ILE N:13 , ASN N:46 , ASP N:47 , TYR N:48 , ILE N:52 , ASP N:54 , ASN N:135 , ASP N:140
BINDING SITE FOR RESIDUE MMA N 506
[
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_FIMC_ECOLI_002 (V18V, chain A, )
2: VAR_FIMC_ECOLI_003 (T174A, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_FIMC_ECOLI_002
*
E
54
V
FIMC_ECOLI
---
---
A
V
18
V
2
UniProt
VAR_FIMC_ECOLI_003
*
T
210
A
FIMC_ECOLI
---
---
A
T
174
A
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PILI_CHAPERONE (A:75-92)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PILI_CHAPERONE
PS00635
Gram-negative pili assembly chaperone signature.
FIMC_ECOLI
111-128
1
A:75-92
-
-
-
-
-
-
-
[
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Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 32)
Info
All SCOP Domains
1a: SCOP_d1kiua2 (A:122-205)
1b: SCOP_d1kiuc2 (C:122-205)
1c: SCOP_d1kiue2 (E:122-205)
1d: SCOP_d1kiug2 (G:122-205)
1e: SCOP_d1kiui2 (I:122-205)
1f: SCOP_d1kiuk2 (K:122-205)
1g: SCOP_d1kium2 (M:122-205)
1h: SCOP_d1kiuo2 (O:122-205)
2a: SCOP_d1kiub1 (B:1-158)
2b: SCOP_d1kiub2 (B:159-279)
2c: SCOP_d1kiud1 (D:1-158)
2d: SCOP_d1kiud2 (D:159-279)
2e: SCOP_d1kiuf1 (F:1-158)
2f: SCOP_d1kiuf2 (F:159-279)
2g: SCOP_d1kiuh1 (H:1-158)
2h: SCOP_d1kiuh2 (H:159-279)
2i: SCOP_d1kiuj1 (J:1-158)
2j: SCOP_d1kiuj2 (J:159-279)
2k: SCOP_d1kiul1 (L:1-158)
2l: SCOP_d1kiul2 (L:159-279)
2m: SCOP_d1kiun1 (N:1-158)
2n: SCOP_d1kiun2 (N:159-279)
2o: SCOP_d1kiup1 (P:1-158)
2p: SCOP_d1kiup2 (P:159-279)
3a: SCOP_d1kiua1 (A:1-121)
3b: SCOP_d1kiuc1 (C:1-121)
3c: SCOP_d1kiue1 (E:1-121)
3d: SCOP_d1kiug1 (G:1-121)
3e: SCOP_d1kiui1 (I:1-121)
3f: SCOP_d1kiuk1 (K:1-121)
3g: SCOP_d1kium1 (M:1-121)
3h: SCOP_d1kiuo1 (O:1-121)
View:
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Classes
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
C2 domain-like
(198)
Superfamily
:
Periplasmic chaperone C-domain
(38)
Family
:
Periplasmic chaperone C-domain
(33)
Protein domain
:
FimC
(8)
Escherichia coli [TaxId: 562]
(8)
1a
d1kiua2
A:122-205
1b
d1kiuc2
C:122-205
1c
d1kiue2
E:122-205
1d
d1kiug2
G:122-205
1e
d1kiui2
I:122-205
1f
d1kiuk2
K:122-205
1g
d1kium2
M:122-205
1h
d1kiuo2
O:122-205
Fold
:
Common fold of diphtheria toxin/transcription factors/cytochrome f
(364)
Superfamily
:
Bacterial adhesins
(93)
Family
:
Pilus subunits
(59)
Protein domain
:
Mannose-specific adhesin FimH
(22)
Escherichia coli [TaxId: 562]
(22)
2a
d1kiub1
B:1-158
2b
d1kiub2
B:159-279
2c
d1kiud1
D:1-158
2d
d1kiud2
D:159-279
2e
d1kiuf1
F:1-158
2f
d1kiuf2
F:159-279
2g
d1kiuh1
H:1-158
2h
d1kiuh2
H:159-279
2i
d1kiuj1
J:1-158
2j
d1kiuj2
J:159-279
2k
d1kiul1
L:1-158
2l
d1kiul2
L:159-279
2m
d1kiun1
N:1-158
2n
d1kiun2
N:159-279
2o
d1kiup1
P:1-158
2p
d1kiup2
P:159-279
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
PapD-like
(47)
Family
:
Pilus chaperone
(36)
Protein domain
:
Periplasmic chaperone FimC
(8)
Escherichia coli [TaxId: 562]
(8)
3a
d1kiua1
A:1-121
3b
d1kiuc1
C:1-121
3c
d1kiue1
E:1-121
3d
d1kiug1
G:1-121
3e
d1kiui1
I:1-121
3f
d1kiuk1
K:1-121
3g
d1kium1
M:1-121
3h
d1kiuo1
O:1-121
[
close SCOP info
]
CATH Domains
(3, 32)
Info
all CATH domains
1a: CATH_1kiuA02 (A:122-204)
1b: CATH_1kiuC02 (C:122-204)
1c: CATH_1kiuE02 (E:122-204)
1d: CATH_1kiuG02 (G:122-204)
1e: CATH_1kiuI02 (I:122-204)
1f: CATH_1kiuK02 (K:122-204)
1g: CATH_1kiuM02 (M:122-204)
1h: CATH_1kiuO02 (O:122-204)
2a: CATH_1kiuB01 (B:1-159)
2b: CATH_1kiuD01 (D:1-159)
2c: CATH_1kiuF01 (F:1-159)
2d: CATH_1kiuH01 (H:1-159)
2e: CATH_1kiuJ01 (J:1-159)
2f: CATH_1kiuL01 (L:1-159)
2g: CATH_1kiuN01 (N:1-159)
2h: CATH_1kiuP01 (P:1-159)
2i: CATH_1kiuB02 (B:160-279)
2j: CATH_1kiuD02 (D:160-279)
2k: CATH_1kiuF02 (F:160-279)
2l: CATH_1kiuH02 (H:160-279)
2m: CATH_1kiuJ02 (J:160-279)
2n: CATH_1kiuL02 (L:160-279)
2o: CATH_1kiuN02 (N:160-279)
2p: CATH_1kiuP02 (P:160-279)
3a: CATH_1kiuA01 (A:2-118)
3b: CATH_1kiuC01 (C:2-118)
3c: CATH_1kiuE01 (E:2-118)
3d: CATH_1kiuG01 (G:2-118)
3e: CATH_1kiuI01 (I:2-118)
3f: CATH_1kiuK01 (K:2-118)
3g: CATH_1kiuM01 (M:2-118)
3h: CATH_1kiuO01 (O:2-118)
View:
Select:
Label:
Classes
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)
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)
Architectures
(
)
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)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.1070, no name defined]
(29)
Escherichia coli. Organism_taxid: 562.
(5)
1a
1kiuA02
A:122-204
1b
1kiuC02
C:122-204
1c
1kiuE02
E:122-204
1d
1kiuG02
G:122-204
1e
1kiuI02
I:122-204
1f
1kiuK02
K:122-204
1g
1kiuM02
M:122-204
1h
1kiuO02
O:122-204
Homologous Superfamily
:
[code=2.60.40.1090, no name defined]
(10)
Escherichia coli. Organism_taxid: 562.
(5)
2a
1kiuB01
B:1-159
2b
1kiuD01
D:1-159
2c
1kiuF01
F:1-159
2d
1kiuH01
H:1-159
2e
1kiuJ01
J:1-159
2f
1kiuL01
L:1-159
2g
1kiuN01
N:1-159
2h
1kiuP01
P:1-159
2i
1kiuB02
B:160-279
2j
1kiuD02
D:160-279
2k
1kiuF02
F:160-279
2l
1kiuH02
H:160-279
2m
1kiuJ02
J:160-279
2n
1kiuL02
L:160-279
2o
1kiuN02
N:160-279
2p
1kiuP02
P:160-279
Homologous Superfamily
:
PapD-like
(38)
Escherichia coli. Organism_taxid: 562.
(6)
3a
1kiuA01
A:2-118
3b
1kiuC01
C:2-118
3c
1kiuE01
E:2-118
3d
1kiuG01
G:2-118
3e
1kiuI01
I:2-118
3f
1kiuK01
K:2-118
3g
1kiuM01
M:2-118
3h
1kiuO01
O:2-118
[
close CATH info
]
Pfam Domains
(4, 32)
Info
all PFAM domains
1a: PFAM_Fimbrial_1kiuP01 (P:146-279)
1b: PFAM_Fimbrial_1kiuP02 (P:146-279)
1c: PFAM_Fimbrial_1kiuP03 (P:146-279)
1d: PFAM_Fimbrial_1kiuP04 (P:146-279)
1e: PFAM_Fimbrial_1kiuP05 (P:146-279)
1f: PFAM_Fimbrial_1kiuP06 (P:146-279)
1g: PFAM_Fimbrial_1kiuP07 (P:146-279)
1h: PFAM_Fimbrial_1kiuP08 (P:146-279)
2a: PFAM_Pili_assembly_N_1kiuO01 (O:1-121)
2b: PFAM_Pili_assembly_N_1kiuO02 (O:1-121)
2c: PFAM_Pili_assembly_N_1kiuO03 (O:1-121)
2d: PFAM_Pili_assembly_N_1kiuO04 (O:1-121)
2e: PFAM_Pili_assembly_N_1kiuO05 (O:1-121)
2f: PFAM_Pili_assembly_N_1kiuO06 (O:1-121)
2g: PFAM_Pili_assembly_N_1kiuO07 (O:1-121)
2h: PFAM_Pili_assembly_N_1kiuO08 (O:1-121)
3a: PFAM_FimH_man_bind_1kiuP09 (P:3-147)
3b: PFAM_FimH_man_bind_1kiuP10 (P:3-147)
3c: PFAM_FimH_man_bind_1kiuP11 (P:3-147)
3d: PFAM_FimH_man_bind_1kiuP12 (P:3-147)
3e: PFAM_FimH_man_bind_1kiuP13 (P:3-147)
3f: PFAM_FimH_man_bind_1kiuP14 (P:3-147)
3g: PFAM_FimH_man_bind_1kiuP15 (P:3-147)
3h: PFAM_FimH_man_bind_1kiuP16 (P:3-147)
4a: PFAM_Pili_assembly_C_1kiuO09 (O:140-201)
4b: PFAM_Pili_assembly_C_1kiuO10 (O:140-201)
4c: PFAM_Pili_assembly_C_1kiuO11 (O:140-201)
4d: PFAM_Pili_assembly_C_1kiuO12 (O:140-201)
4e: PFAM_Pili_assembly_C_1kiuO13 (O:140-201)
4f: PFAM_Pili_assembly_C_1kiuO14 (O:140-201)
4g: PFAM_Pili_assembly_C_1kiuO15 (O:140-201)
4h: PFAM_Pili_assembly_C_1kiuO16 (O:140-201)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Adhesin
(36)
Family
:
Fimbrial
(23)
Escherichia coli (strain K12)
(7)
1a
Fimbrial-1kiuP01
P:146-279
1b
Fimbrial-1kiuP02
P:146-279
1c
Fimbrial-1kiuP03
P:146-279
1d
Fimbrial-1kiuP04
P:146-279
1e
Fimbrial-1kiuP05
P:146-279
1f
Fimbrial-1kiuP06
P:146-279
1g
Fimbrial-1kiuP07
P:146-279
1h
Fimbrial-1kiuP08
P:146-279
Clan
:
E-set
(290)
Family
:
Pili_assembly_N
(20)
Escherichia coli (strain K12)
(3)
2a
Pili_assembly_N-1kiuO01
O:1-121
2b
Pili_assembly_N-1kiuO02
O:1-121
2c
Pili_assembly_N-1kiuO03
O:1-121
2d
Pili_assembly_N-1kiuO04
O:1-121
2e
Pili_assembly_N-1kiuO05
O:1-121
2f
Pili_assembly_N-1kiuO06
O:1-121
2g
Pili_assembly_N-1kiuO07
O:1-121
2h
Pili_assembly_N-1kiuO08
O:1-121
Clan
:
no clan defined [family: FimH_man-bind]
(6)
Family
:
FimH_man-bind
(6)
Escherichia coli (strain K12)
(4)
3a
FimH_man-bind-1kiuP09
P:3-147
3b
FimH_man-bind-1kiuP10
P:3-147
3c
FimH_man-bind-1kiuP11
P:3-147
3d
FimH_man-bind-1kiuP12
P:3-147
3e
FimH_man-bind-1kiuP13
P:3-147
3f
FimH_man-bind-1kiuP14
P:3-147
3g
FimH_man-bind-1kiuP15
P:3-147
3h
FimH_man-bind-1kiuP16
P:3-147
Clan
:
no clan defined [family: Pili_assembly_C]
(20)
Family
:
Pili_assembly_C
(20)
Escherichia coli (strain K12)
(3)
4a
Pili_assembly_C-1kiuO09
O:140-201
4b
Pili_assembly_C-1kiuO10
O:140-201
4c
Pili_assembly_C-1kiuO11
O:140-201
4d
Pili_assembly_C-1kiuO12
O:140-201
4e
Pili_assembly_C-1kiuO13
O:140-201
4f
Pili_assembly_C-1kiuO14
O:140-201
4g
Pili_assembly_C-1kiuO15
O:140-201
4h
Pili_assembly_C-1kiuO16
O:140-201
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Asym.Unit (609 KB)
Header - Asym.Unit
Biol.Unit 1 (84 KB)
Header - Biol.Unit 1
Biol.Unit 10 (305 KB)
Header - Biol.Unit 10
Biol.Unit 11 (305 KB)
Header - Biol.Unit 11
Biol.Unit 2 (84 KB)
Header - Biol.Unit 2
Biol.Unit 3 (84 KB)
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Biol.Unit 4 (84 KB)
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Biol.Unit 9 (305 KB)
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(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
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