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1KB5
Asym. Unit
Info
Asym.Unit (117 KB)
Biol.Unit 1 (111 KB)
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(1)
Title
:
MURINE T-CELL RECEPTOR VARIABLE DOMAIN/FAB COMPLEX
Authors
:
D. Housset, G. Mazza, C. Gregoire, C. Piras, B. Malissen, J. C. Fontecilla-Camps
Date
:
06 Apr 97 (Deposition) - 08 Apr 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,H,L
Biol. Unit 1: A,B,H,L (1x)
Keywords
:
T-Cell Receptor, Strand Switch, Fab, Anticlonotypic, (Immunoglobulin/Receptor), Complex (Immunoglobulin/Receptor) Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Housset, G. Mazza, C. Gregoire, C. Piras, B. Malissen, J. C. Fontecilla-Camps
The Three-Dimensional Structure Of A T-Cell Antigen Receptor V Alpha V Beta Heterodimer Reveals A Novel Arrangement Of The V Beta Domain.
Embo J. V. 16 4205 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: IG_MHC (L:192-198)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IG_MHC
PS00290
Immunoglobulins and major histocompatibility complex proteins signature.
IGKC_MOUSE
84-90
1
L:192-198
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(6, 6)
Info
All SCOP Domains
1a: SCOP_d1kb5h2 (H:114-213)
2a: SCOP_d1kb5l2 (L:109-214)
3a: SCOP_d1kb5h1 (H:1-113)
4a: SCOP_d1kb5l1 (L:1-108)
5a: SCOP_d1kb5a_ (A:)
6a: SCOP_d1kb5b_ (B:)
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Protein Domains
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(
)
Organisms
(
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(
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma
(608)
Mouse (Mus musculus) [TaxId: 10090]
(414)
1a
d1kb5h2
H:114-213
Protein domain
:
Immunoglobulin light chain kappa constant domain, CL-kappa
(495)
Mouse (Mus musculus) [TaxId: 10090]
(345)
2a
d1kb5l2
L:109-214
Family
:
V set domains (antibody variable domain-like)
(1919)
Protein domain
:
Immunoglobulin heavy chain variable domain, VH
(658)
Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
(177)
3a
d1kb5h1
H:1-113
Protein domain
:
Immunoglobulin light chain kappa variable domain, VL-kappa
(616)
Mouse (Mus musculus), cluster 4 [TaxId: 10090]
(211)
4a
d1kb5l1
L:1-108
Protein domain
:
T-cell antigen receptor
(105)
Mouse (Mus musculus), alpha-chain [TaxId: 10090]
(21)
5a
d1kb5a_
A:
Mouse (Mus musculus), beta-chain [TaxId: 10090]
(28)
6a
d1kb5b_
B:
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1kb5L02 (L:109-214)
1b: CATH_1kb5H02 (H:114-212)
1c: CATH_1kb5H01 (H:1-113)
1d: CATH_1kb5A00 (A:1-120)
1e: CATH_1kb5B00 (B:1-116A)
1f: CATH_1kb5L01 (L:1-108)
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)
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)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
House mouse (Mus musculus)
(616)
1a
1kb5L02
L:109-214
1b
1kb5H02
H:114-212
1c
1kb5H01
H:1-113
1d
1kb5A00
A:1-120
1e
1kb5B00
B:1-116A
1f
1kb5L01
L:1-108
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_C1_set_1kb5L01 (L:119-206)
2a: PFAM_V_set_1kb5B01 (B:2-116)
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Organisms
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)
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Clan
:
Ig
(577)
Family
:
C1-set
(338)
Mus musculus (Mouse)
(118)
1a
C1-set-1kb5L01
L:119-206
Family
:
V-set
(144)
Mus musculus (Mouse)
(63)
2a
V-set-1kb5B01
B:2-116
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Asymmetric Unit 1
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Asym.Unit (117 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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