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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
1K9Z
Asym. Unit
Info
Asym.Unit (69 KB)
Biol.Unit 1 (63 KB)
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(1)
Title
:
THE PAPASE HAL2P COMPLEXED WITH ZINC IONS
Authors
:
S. Patel, A. Albert, T. L. Blundell
Date
:
31 Oct 01 (Deposition) - 07 Nov 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Nucleotidase, Salt Tolerance, Inositol, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Patel, A. Albert, T. L. Blundell
Hal2P: Ion Selectivity And Implications On Inhibition Mechanism
To Be Published
(for further references see the
PDB file header
)
[
close entry info
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
2g: ZINC ION (ZNg)
2h: ZINC ION (ZNh)
2i: ZINC ION (ZNi)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
2
ZN
9
Ligand/Ion
ZINC ION
[
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:72 , ZN A:402 , HOH A:502 , HOH A:503 , HOH A:517 , HOH A:518 , HOH A:793
BINDING SITE FOR RESIDUE ZN A 401
02
AC2
SOFTWARE
GLU A:72 , ASP A:142 , ILE A:144 , ZN A:401 , HOH A:518 , HOH A:794
BINDING SITE FOR RESIDUE ZN A 402
03
AC3
SOFTWARE
ASP A:142 , ASP A:145 , ASP A:294 , HOH A:505 , HOH A:511 , HOH A:803
BINDING SITE FOR RESIDUE ZN A 403
04
AC4
SOFTWARE
GLU A:27 , GLU A:89 , HOH A:566 , HOH A:653
BINDING SITE FOR RESIDUE ZN A 404
05
AC5
SOFTWARE
HIS A:221 , HIS A:224 , HOH A:560 , HOH A:665 , HOH A:668
BINDING SITE FOR RESIDUE ZN A 405
06
AC6
SOFTWARE
GLU A:235 , HIS A:244 , HIS A:261 , HOH A:613 , HOH A:720
BINDING SITE FOR RESIDUE ZN A 406
07
AC7
SOFTWARE
HIS A:191 , GLU A:192 , ZN A:408 , HOH A:620 , HOH A:646 , HOH A:729
BINDING SITE FOR RESIDUE ZN A 407
08
AC8
SOFTWARE
GLU A:131 , HIS A:191 , ZN A:407 , HOH A:522 , HOH A:620 , HOH A:646
BINDING SITE FOR RESIDUE ZN A 408
09
AC9
SOFTWARE
ASP A:315 , ASP A:342 , HOH A:748 , HOH A:786
BINDING SITE FOR RESIDUE ZN A 409
10
BC1
SOFTWARE
MET A:313 , CYS A:349 , GLN A:353
BINDING SITE FOR RESIDUE BME A 501
[
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_MET22_YEAST_001 (N40S, chain A, )
2: VAR_MET22_YEAST_002 (K61M, chain A, )
3: VAR_MET22_YEAST_003 (N63S, chain A, )
4: VAR_MET22_YEAST_004 (I308V, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_MET22_YEAST_001
*
N
40
S
MET22_YEAST
---
---
A
N
40
S
2
UniProt
VAR_MET22_YEAST_002
*
K
61
M
MET22_YEAST
---
---
A
K
61
M
3
UniProt
VAR_MET22_YEAST_003
*
N
63
S
MET22_YEAST
---
---
A
N
63
S
4
UniProt
VAR_MET22_YEAST_004
*
I
308
V
MET22_YEAST
---
---
A
I
308
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: IMP_1 (A:139-152)
2: IMP_2 (A:293-307)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
IMP_1
PS00629
Inositol monophosphatase family signature 1.
MET22_YEAST
139-152
1
A:139-152
2
IMP_2
PS00630
Inositol monophosphatase family signature 2.
MET22_YEAST
293-307
1
A:293-307
[
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]
Exons
(1, 1)
Info
All Exons
Exon 1.1 (A:2-355)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YOL064C
1
YOL064C.1
XV:207176-206103
1074
MET22_YEAST
1-357
357
1
A:2-355
354
[
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]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1k9za_ (A:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Carbohydrate phosphatase
(140)
Superfamily
:
Carbohydrate phosphatase
(140)
Family
:
Inositol monophosphatase/fructose-1,6-bisphosphatase-like
(121)
Protein domain
:
3';5'-adenosine bisphosphatase, PAP phosphatase
(5)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(4)
1a
d1k9za_
A:
[
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1k9zA01 (A:2-220)
2a: CATH_1k9zA02 (A:221-355)
View:
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(
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(
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)
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Fructose-1,6-Bisphosphatase; Chain A, domain 1
(114)
Homologous Superfamily
:
Fructose-1,6-Bisphosphatase, subunit A, domain 1
(114)
Baker's yeast (Saccharomyces cerevisiae)
(5)
1a
1k9zA01
A:2-220
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
D-Maltodextrin-Binding Protein; domain 2
(600)
Homologous Superfamily
:
[code=3.40.190.80, no name defined]
(109)
Baker's yeast (Saccharomyces cerevisiae)
(5)
2a
1k9zA02
A:221-355
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Sorry, no Info available
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Atom Selection
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Protein
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Chain A
Asymmetric Unit 1
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Asym.Unit (69 KB)
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