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1K36
Asym. Unit
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Asym.Unit (474 KB)
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Models
(40 )
Title
:
NMR STRUCTURE OF HUMAN EPIREGULIN
Authors
:
K. Sato, K. Miura, M. Tada, T. Aizawa, K. Miyamoto, K. Kawano
Date
:
02 Oct 01 (Deposition) - 30 Sep 03 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (40 x)
Keywords
:
Egf-Like Fold, Hormone/Growth Factor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Sato, T. Nakamura, M. Mizuguchi, K. Miura, M. Tada, T. Aizawa, T. Gomi, K. Miyamoto, K. Kawano
Solution Structure Of Epiregulin And The Effect Of Its C-Terminal Domain For Receptor Binding Affinity
Febs Lett. V. 553 232 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 2)
Info
All PROSITE Patterns/Profiles
1: EGF_3 (A:2-42)
2: EGF_1 (A:30-41)
3: EGF_2 (A:30-41)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EGF_3
PS50026
EGF-like domain profile.
EREG_HUMAN
64-104
1
A:2-42
2
EGF_1
PS00022
EGF-like domain signature 1.
EREG_HUMAN
92-103
1
A:30-41
3
EGF_2
PS01186
EGF-like domain signature 2.
EREG_HUMAN
92-103
1
A:30-41
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Exons
(2, 2)
Info
All Exons
Exon 1.3a (A:1-31)
Exon 1.4b (A:31-46)
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All Exon Boundaries
1: Boundary 1.2/1.3a
2: Boundary 1.3a/1.4b
3: Boundary 1.4b/1.5b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000244869
1a
ENSE00001025095
chr4:
75230860-75231092
233
EREG_HUMAN
1-23
23
0
-
-
1.2
ENST00000244869
2
ENSE00000851077
chr4:
75245165-75245251
87
EREG_HUMAN
23-52
30
0
-
-
1.3a
ENST00000244869
3a
ENSE00000851078
chr4:
75246731-75246854
124
EREG_HUMAN
52-93
42
1
A:1-31
31
1.4b
ENST00000244869
4b
ENSE00000851079
chr4:
75248362-75248511
150
EREG_HUMAN
93-143
51
1
A:31-46
16
1.5b
ENST00000244869
5b
ENSE00000851080
chr4:
75250444-75254468
4025
EREG_HUMAN
143-169
27
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d1k36a_ (A:)
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Protein Domains
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(
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Organisms
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)
(
)
Class
:
Small proteins
(3458)
Fold
:
Knottins (small inhibitors, toxins, lectins)
(761)
Superfamily
:
EGF/Laminin
(347)
Family
:
EGF-type module
(304)
Protein domain
:
Epiregulin, EGF-domain
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1k36a_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1k36A00 (A:1-46)
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Class
:
Mainly Beta
(13760)
Architecture
:
Ribbon
(789)
Topology
:
Laminin
(270)
Homologous Superfamily
:
Laminin
(263)
Human (Homo sapiens)
(195)
1a
1k36A00
A:1-46
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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