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1K25
Biol. Unit 4
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Asym.Unit (350 KB)
Biol.Unit 1 (88 KB)
Biol.Unit 2 (92 KB)
Biol.Unit 3 (88 KB)
Biol.Unit 4 (89 KB)
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(1)
Title
:
PBP2X FROM A HIGHLY PENICILLIN-RESISTANT STREPTOCOCCUS PNEUMONIAE CLINICAL ISOLATE
Authors
:
A. Dessen, N. Mouz, J. Hopkins, O. Dideberg
Date
:
26 Sep 01 (Deposition) - 31 Oct 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Antibiotic Resistance, Clinical Mutant, Low-Affinity Penicillin-Binding, Membrane Protein
(Keyword Search:
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Reference
:
A. Dessen, N. Mouz, E. Gordon, J. Hopkins, O. Dideberg
Crystal Structure Of Pbp2X From A Highly Penicillin-Resistant Streptococcus Pneumoniae Clinical Isolate: A Mosaic Framework Containing 83 Mutations.
J. Biol. Chem. V. 276 45106 2001
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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SCOP Domains
(3, 16)
Info
All SCOP Domains
1a: SCOP_d1k25a3 (A:67-263)
1b: SCOP_d1k25b3 (B:1066-1263)
1c: SCOP_d1k25c3 (C:2067-2263)
1d: SCOP_d1k25d3 (D:3066-3263)
2a: SCOP_d1k25a1 (A:632-692)
2b: SCOP_d1k25a2 (A:693-750)
2c: SCOP_d1k25b1 (B:1632-1692)
2d: SCOP_d1k25b2 (B:1693-1749)
2e: SCOP_d1k25c1 (C:2632-2692)
2f: SCOP_d1k25c2 (C:2693-2750)
2g: SCOP_d1k25d1 (D:3632-3692)
2h: SCOP_d1k25d2 (D:3693-3749)
3a: SCOP_d1k25a4 (A:264-631)
3b: SCOP_d1k25b4 (B:1264-1631)
3c: SCOP_d1k25c4 (C:2264-2631)
3d: SCOP_d1k25d4 (D:3264-3612)
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Protein Domains
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Penicillin binding protein dimerisation domain
(32)
Superfamily
:
Penicillin binding protein dimerisation domain
(32)
Family
:
Penicillin binding protein dimerisation domain
(12)
Protein domain
:
Penicillin-binding protein 2x (pbp-2x), N-terminal domain
(6)
Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
(6)
1a
d1k25a3
A:67-263
1b
d1k25b3
B:1066-1263
1c
d1k25c3
C:2067-2263
1d
d1k25d3
D:3066-3263
Fold
:
Penicillin-binding protein 2x (pbp-2x), c-terminal domain
(10)
Superfamily
:
Penicillin-binding protein 2x (pbp-2x), c-terminal domain
(10)
Family
:
Penicillin-binding protein 2x (pbp-2x), c-terminal domain
(10)
Protein domain
:
Penicillin-binding protein 2x (pbp-2x), c-terminal domain
(10)
Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
(10)
2a
d1k25a1
A:632-692
2b
d1k25a2
A:693-750
2c
d1k25b1
B:1632-1692
2d
d1k25b2
B:1693-1749
2e
d1k25c1
C:2632-2692
2f
d1k25c2
C:2693-2750
2g
d1k25d1
D:3632-3692
2h
d1k25d2
D:3693-3749
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
beta-lactamase/transpeptidase-like
(515)
Superfamily
:
beta-lactamase/transpeptidase-like
(515)
Family
:
beta-Lactamase/D-ala carboxypeptidase
(411)
Protein domain
:
Penicillin-binding protein 2x (pbp-2x), transpeptidase domain
(10)
Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
(10)
3a
d1k25a4
A:264-631
3b
d1k25b4
B:1264-1631
3c
d1k25c4
C:2264-2631
3d
d1k25d4
D:3264-3612
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CATH Domains
(1, 1)
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1a: CATH_1k25B02 (B:1265-1480,B:1495-1629)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Beta-lactamase
(339)
Homologous Superfamily
:
DD-peptidase/beta-lactamase superfamily
(335)
Streptococcus pneumoniae. Organism_taxid: 1313.
(1)
1a
1k25B02
B:1265-1480,B:1495-1629
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Pfam Domains
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Chain D
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (350 KB)
Header - Asym.Unit
Biol.Unit 1 (88 KB)
Header - Biol.Unit 1
Biol.Unit 2 (92 KB)
Header - Biol.Unit 2
Biol.Unit 3 (88 KB)
Header - Biol.Unit 3
Biol.Unit 4 (89 KB)
Header - Biol.Unit 4
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