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1K1B
Asym. Unit
Info
Asym.Unit (43 KB)
Biol.Unit 1 (39 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ANKYRIN REPEAT DOMAIN OF BCL-3: A UNIQUE MEMBER OF THE IKAPPAB PROTEIN FAMILY
Authors
:
F. Michel, M. Soler-Lopez, C. Petosa, P. Cramer, U. Siebenlist, C. W. Mueller
Date
:
24 Sep 01 (Deposition) - 21 Nov 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Bcl-3, Nf-Kappab Transcription Factors, Ikappab Proteins
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Michel, M. Soler-Lopez, C. Petosa, P. Cramer, U. Siebenlist, C. W. Muller
Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family.
Embo J. V. 20 6180 2001
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sorry, no Info available
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: ANK_REP_REGION (A:126-351)
2: ANK_REPEAT (A:126-162|A:163-195|A:233-265|A:26...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANK_REP_REGION
PS50297
Ankyrin repeat region circular profile.
BCL3_HUMAN
134-359
1
A:126-351
2
ANK_REPEAT
PS50088
Ankyrin repeat profile.
BCL3_HUMAN
134-170
171-203
241-273
275-307
308-340
5
A:126-162
A:163-195
A:233-265
A:267-299
A:300-332
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Exons
(7, 7)
Info
All Exons
Exon 1.3b (A:125-129)
Exon 1.5b (A:129-165)
Exon 1.6b (A:166-234)
Exon 1.7b (A:234-263)
Exon 1.8b (A:264-289)
Exon 1.9a (A:290-345)
Exon 1.9e (A:346-352)
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All Exon Boundaries
1: Boundary 1.2a/1.3b
2: Boundary 1.3b/1.5b
3: Boundary 1.5b/1.6b
4: Boundary 1.6b/1.7b
5: Boundary 1.7b/1.8b
6: Boundary 1.8b/1.9a
7: Boundary 1.9a/1.9e
8: Boundary 1.9e/1.10d
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000164227
2a
ENSE00001823746
chr19:
45251804-45252303
500
BCL3_HUMAN
1-86
86
0
-
-
1.3b
ENST00000164227
3b
ENSE00000711938
chr19:
45254484-45254637
154
BCL3_HUMAN
86-137
52
1
A:125-129
5
1.5b
ENST00000164227
5b
ENSE00000711934
chr19:
45259489-45259597
109
BCL3_HUMAN
137-173
37
1
A:129-165
37
1.6b
ENST00000164227
6b
ENSE00000711931
chr19:
45260274-45260478
205
BCL3_HUMAN
174-242
69
1
A:166-234
69
1.7b
ENST00000164227
7b
ENSE00001210344
chr19:
45260584-45260672
89
BCL3_HUMAN
242-271
30
1
A:234-263
30
1.8b
ENST00000164227
8b
ENSE00001210342
chr19:
45260903-45260980
78
BCL3_HUMAN
272-297
26
1
A:264-289
26
1.9a
ENST00000164227
9a
ENSE00001159742
chr19:
45261503-45261670
168
BCL3_HUMAN
298-353
56
1
A:290-345
56
1.9e
ENST00000164227
9e
ENSE00001210335
chr19:
45261981-45262098
118
BCL3_HUMAN
354-393
40
1
A:346-352
7
1.10d
ENST00000164227
10d
ENSE00001549617
chr19:
45262685-45263301
617
BCL3_HUMAN
393-454
62
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1k1ba_ (A:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-hairpin-alpha-hairpin repeat
(81)
Superfamily
:
Ankyrin repeat
(79)
Family
:
Ankyrin repeat
(60)
Protein domain
:
bcl-3
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1k1ba_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1k1bA00 (A:125-352)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.20, no name defined]
(65)
Human (Homo sapiens)
(31)
1a
1k1bA00
A:125-352
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Ank_1k1bA01 (A:267-299)
1b: PFAM_Ank_1k1bA02 (A:267-299)
1c: PFAM_Ank_1k1bA03 (A:267-299)
1d: PFAM_Ank_1k1bA04 (A:267-299)
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Clan
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Ank
(35)
Family
:
Ank
(23)
Homo sapiens (Human)
(14)
1a
Ank-1k1bA01
A:267-299
1b
Ank-1k1bA02
A:267-299
1c
Ank-1k1bA03
A:267-299
1d
Ank-1k1bA04
A:267-299
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Asymmetric Unit 1
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