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1JT5
Biol. Unit 3
Info
Asym.Unit (56 KB)
Biol.Unit 1 (27 KB)
Biol.Unit 2 (27 KB)
Biol.Unit 3 (52 KB)
Biol.Unit 4 (52 KB)
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(1)
Title
:
HUMAN ACIDIC FIBROBLAST GROWTH FACTOR. 141 AMINO ACID FORM WITH AMINO TERMINAL HIS TAG AND LEU 73 REPLACED BY VAL AND VAL 109 REPLACED BY LEU (L73V/V109L)
Authors
:
S. R. Brych, S. I. Blaber, T. M. Logan, M. Blaber
Date
:
20 Aug 01 (Deposition) - 19 Dec 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: A,B (1x)
Keywords
:
Beta-Trefoil, Hormone-Growth Factor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. R. Brych, S. I. Blaber, T. M. Logan, M. Blaber
Structure And Stability Effects Of Mutations Designed To Increase The Primary Sequence Symmetry Within The Core Region Of A Beta-Trefoil.
Protein Sci. V. 10 2587 2001
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:1E , HIS A:1F , TYR A:125 , HIS B:1E , HIS B:1F , TYR B:125 , HOH B:1437
BINDING SITE FOR RESIDUE SO4 A 160
2
AC2
SOFTWARE
ASN A:18 , LYS A:112 , LYS A:113 , LYS A:118 , HOH A:310
BINDING SITE FOR RESIDUE SO4 A 161
3
AC3
SOFTWARE
ASN A:106 , HIS A:124 , TYR A:125 , HOH A:206 , HIS B:1D
BINDING SITE FOR RESIDUE SO4 B 162
4
AC4
SOFTWARE
ASN B:18 , LYS B:112 , LYS B:113 , HOH B:1270
BINDING SITE FOR RESIDUE SO4 B 163
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_021357 (G6E, chain A/B, )
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021357
G
21
E
FGF1_HUMAN
Polymorphism
17223632
A/B
G
6
E
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: HBGF_FGF (A:71-94,B:71-94)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HBGF_FGF
PS00247
HBGF/FGF family signature.
FGF1_HUMAN
86-109
2
A:71-94
B:71-94
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1jt5a_ (A:)
1b: SCOP_d1jt5b_ (B:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Cytokine
(169)
Family
:
Fibroblast growth factors (FGF)
(120)
Protein domain
:
Acidic FGF (FGF1)
(88)
Human (Homo sapiens) [TaxId: 9606]
(84)
1a
d1jt5a_
A:
1b
d1jt5b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1jt5A00 (A:1B-137)
1b: CATH_1jt5B00 (B:1B-137)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
Human (Homo sapiens)
(131)
1a
1jt5A00
A:1B-137
1b
1jt5B00
B:1B-137
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_FGF_1jt5B01 (B:10-133)
1b: PFAM_FGF_1jt5B02 (B:10-133)
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Clans
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Organisms
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)
(
)
Clan
:
Trefoil
(131)
Family
:
FGF
(36)
Homo sapiens (Human)
(34)
1a
FGF-1jt5B01
B:10-133
1b
FGF-1jt5B02
B:10-133
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (56 KB)
Header - Asym.Unit
Biol.Unit 1 (27 KB)
Header - Biol.Unit 1
Biol.Unit 2 (27 KB)
Header - Biol.Unit 2
Biol.Unit 3 (52 KB)
Header - Biol.Unit 3
Biol.Unit 4 (52 KB)
Header - Biol.Unit 4
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