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1JQZ
Biol. Unit 2
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Asym.Unit (55 KB)
Biol.Unit 1 (27 KB)
Biol.Unit 2 (27 KB)
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(1)
Title
:
HUMAN ACIDIC FIBROBLAST GROWTH FACTOR. 141 AMINO ACID FORM WITH AMINO TERMINAL HIS TAG.
Authors
:
S. R. Brych, S. I. Blaber, T. M. Logan, M. Blaber
Date
:
09 Aug 01 (Deposition) - 19 Dec 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Beta-Trefoil, Hormone/Growth Factor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. R. Brych, S. I. Blaber, T. M. Logan, M. Blaber
Structure And Stability Effects Of Mutations Designed To Increase The Primary Sequence Symmetry Within The Core Region Of A Beta-Trefoil.
Protein Sci. V. 10 2587 2001
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: FORMIC ACID (FMTa)
1b: FORMIC ACID (FMTb)
1c: FORMIC ACID (FMTc)
1d: FORMIC ACID (FMTd)
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Label:
No.
Name
Count
Type
Full Name
1
FMT
2
Ligand/Ion
FORMIC ACID
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Sites
(2, 2)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
HIS B:1C , HIS B:1D , HIS B:1E , LEU B:86 , HOH B:1235 , HOH B:1416
BINDING SITE FOR RESIDUE FMT B 162
2
AC4
SOFTWARE
GLN B:127 , LYS B:128 , ALA B:129 , HOH B:1270
BINDING SITE FOR RESIDUE FMT B 163
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_021357 (G6E, chain B, )
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021357
G
21
E
FGF1_HUMAN
Polymorphism
17223632
B
G
6
E
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: HBGF_FGF (B:71-94)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HBGF_FGF
PS00247
HBGF/FGF family signature.
FGF1_HUMAN
86-109
1
-
B:71-94
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1jqza_ (A:)
1b: SCOP_d1jqzb_ (B:)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Cytokine
(169)
Family
:
Fibroblast growth factors (FGF)
(120)
Protein domain
:
Acidic FGF (FGF1)
(88)
Human (Homo sapiens) [TaxId: 9606]
(84)
1a
d1jqza_
A:
1b
d1jqzb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1jqzA00 (A:1C-137)
1b: CATH_1jqzB00 (B:1C-137)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
Human (Homo sapiens)
(131)
1a
1jqzA00
A:1C-137
1b
1jqzB00
B:1C-137
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_FGF_1jqzB01 (B:10-133)
1b: PFAM_FGF_1jqzB02 (B:10-133)
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Clans
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)
Clan
:
Trefoil
(131)
Family
:
FGF
(36)
Homo sapiens (Human)
(34)
1a
FGF-1jqzB01
B:10-133
1b
FGF-1jqzB02
B:10-133
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Chain B
Asymmetric Unit 1
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Asym.Unit (55 KB)
Header - Asym.Unit
Biol.Unit 1 (27 KB)
Header - Biol.Unit 1
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Header - Biol.Unit 2
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