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1JQH
Biol. Unit 1
Info
Asym.Unit (154 KB)
Biol.Unit 1 (52 KB)
Biol.Unit 2 (51 KB)
Biol.Unit 3 (52 KB)
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(1)
Title
:
IGF-1 RECEPTOR KINASE DOMAIN
Authors
:
A. Pautsch, A. Zoephel, H. Ahorn, W. Spevak, R. Hauptmann, H. Nar
Date
:
07 Aug 01 (Deposition) - 19 Apr 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Protein Kinase Fold, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Pautsch, A. Zoephel, H. Ahorn, W. Spevak, R. Hauptmann, H. Nar
Crystal Structure Of Bisphosphorylated Igf-1 Receptor Kinase: Insight Into Domain Movements Upon Kinase Activation.
Structure V. 9 955 2001
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPb)
1c: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPc)
2a: MAGNESIUM ION (MGa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ANP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
MG
-1
Ligand/Ion
MAGNESIUM ION
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:250 , HOH A:251 , ANP A:301
BINDING SITE FOR RESIDUE MG A 304
2
AC2
SOFTWARE
HOH A:36 , HOH A:219 , HOH A:241 , LEU A:1104 , ALA A:1105 , GLN C:1220 , ARG C:1223
BINDING SITE FOR RESIDUE SO4 A 305
3
AC5
SOFTWARE
HOH A:105 , HOH A:106 , HOH A:107 , HOH A:206 , HOH A:250 , HOH A:251 , MG A:304 , LEU A:1005 , GLY A:1006 , GLN A:1007 , GLY A:1008 , SER A:1009 , VAL A:1013 , ALA A:1031 , LYS A:1033 , GLU A:1080 , LEU A:1081 , MET A:1082 , MET A:1142
BINDING SITE FOR RESIDUE ANP A 301
[
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_076249 (R1256S, chain A, )
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_076249
R
1256
S
IGF1R_HUMAN
Disease (IGF1RES)
---
A
R
1256
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:1005-1033)
2: PROTEIN_KINASE_TYR (A:1131-1143)
3: RECEPTOR_TYR_KIN_II (A:1165-1167)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
IGF1R_HUMAN
1005-1033
1
A:1005-1033
-
-
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
IGF1R_HUMAN
1131-1143
1
A:1131-1143
-
-
3
RECEPTOR_TYR_KIN_II
PS00239
Receptor tyrosine kinase class II signature.
IGF1R_HUMAN
1159-1167
1
A:1165-1167
-
-
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1jqha_ (A:)
1b: SCOP_d1jqhb_ (B:)
1c: SCOP_d1jqhc_ (C:)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Insulin-like growth factor 1 receptor
(16)
Human (Homo sapiens) [TaxId: 9606]
(16)
1a
d1jqha_
A:
1b
d1jqhb_
B:
1c
d1jqhc_
C:
[
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_1jqhA01 (A:984-1078)
1b: CATH_1jqhB01 (B:984-1078)
1c: CATH_1jqhC01 (C:984-1078)
2a: CATH_1jqhA02 (A:1079-1279)
2b: CATH_1jqhC02 (C:1079-1279)
2c: CATH_1jqhB02 (B:1079-1279)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
1jqhA01
A:984-1078
1b
1jqhB01
B:984-1078
1c
1jqhC01
C:984-1078
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
1jqhA02
A:1079-1279
2b
1jqhC02
C:1079-1279
2c
1jqhB02
B:1079-1279
[
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Pkinase_Tyr_1jqhC01 (C:999-1266)
1b: PFAM_Pkinase_Tyr_1jqhC02 (C:999-1266)
1c: PFAM_Pkinase_Tyr_1jqhC03 (C:999-1266)
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)
Clan
:
PKinase
(934)
Family
:
Pkinase_Tyr
(229)
Homo sapiens (Human)
(202)
1a
Pkinase_Tyr-1jqhC01
C:999-1266
1b
Pkinase_Tyr-1jqhC02
C:999-1266
1c
Pkinase_Tyr-1jqhC03
C:999-1266
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (154 KB)
Header - Asym.Unit
Biol.Unit 1 (52 KB)
Header - Biol.Unit 1
Biol.Unit 2 (51 KB)
Header - Biol.Unit 2
Biol.Unit 3 (52 KB)
Header - Biol.Unit 3
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