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1JOF
Asym. Unit
Info
Asym.Unit (459 KB)
Biol.Unit 1 (227 KB)
Biol.Unit 2 (227 KB)
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(1)
Title
:
NEUROSPORA CRASSA 3-CARBOXY-CIS,CIS-MUCOANTE LACTONIZING ENZYME
Authors
:
T. Kajander, M. C. Merckel, A. Thompson, A. M. Deacon, P. Mazur, J. W. Kozarich, A. Goldman
Date
:
28 Jul 01 (Deposition) - 12 Apr 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Beta-Propeller, Homotetramer, Semet-Protein, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Kajander, M. C. Merckel, A. Thompson, A. M. Deacon, P. Mazur, J. W. Kozarich, A. Goldman
The Structure Of Neurospora Crassa 3-Carboxy-Cis, Cis-Muconate Lactonizing Enzyme, A Beta Propeller Cycloisomerase.
Structure V. 10 483 2002
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(4, 106)
Info
All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
1b: BETA-MERCAPTOETHANOL (BMEb)
1c: BETA-MERCAPTOETHANOL (BMEc)
1d: BETA-MERCAPTOETHANOL (BMEd)
1e: BETA-MERCAPTOETHANOL (BMEe)
1f: BETA-MERCAPTOETHANOL (BMEf)
1g: BETA-MERCAPTOETHANOL (BMEg)
1h: BETA-MERCAPTOETHANOL (BMEh)
1i: BETA-MERCAPTOETHANOL (BMEi)
1j: BETA-MERCAPTOETHANOL (BMEj)
1k: BETA-MERCAPTOETHANOL (BMEk)
1l: BETA-MERCAPTOETHANOL (BMEl)
1m: BETA-MERCAPTOETHANOL (BMEm)
1n: BETA-MERCAPTOETHANOL (BMEn)
1o: BETA-MERCAPTOETHANOL (BMEo)
1p: BETA-MERCAPTOETHANOL (BMEp)
2a: SELENOMETHIONINE (MSEa)
2aa: SELENOMETHIONINE (MSEaa)
2ab: SELENOMETHIONINE (MSEab)
2ac: SELENOMETHIONINE (MSEac)
2ad: SELENOMETHIONINE (MSEad)
2ae: SELENOMETHIONINE (MSEae)
2af: SELENOMETHIONINE (MSEaf)
2ag: SELENOMETHIONINE (MSEag)
2ah: SELENOMETHIONINE (MSEah)
2ai: SELENOMETHIONINE (MSEai)
2aj: SELENOMETHIONINE (MSEaj)
2ak: SELENOMETHIONINE (MSEak)
2al: SELENOMETHIONINE (MSEal)
2am: SELENOMETHIONINE (MSEam)
2an: SELENOMETHIONINE (MSEan)
2ao: SELENOMETHIONINE (MSEao)
2ap: SELENOMETHIONINE (MSEap)
2aq: SELENOMETHIONINE (MSEaq)
2ar: SELENOMETHIONINE (MSEar)
2as: SELENOMETHIONINE (MSEas)
2at: SELENOMETHIONINE (MSEat)
2au: SELENOMETHIONINE (MSEau)
2av: SELENOMETHIONINE (MSEav)
2aw: SELENOMETHIONINE (MSEaw)
2ax: SELENOMETHIONINE (MSEax)
2ay: SELENOMETHIONINE (MSEay)
2az: SELENOMETHIONINE (MSEaz)
2b: SELENOMETHIONINE (MSEb)
2ba: SELENOMETHIONINE (MSEba)
2bb: SELENOMETHIONINE (MSEbb)
2bc: SELENOMETHIONINE (MSEbc)
2bd: SELENOMETHIONINE (MSEbd)
2be: SELENOMETHIONINE (MSEbe)
2bf: SELENOMETHIONINE (MSEbf)
2bg: SELENOMETHIONINE (MSEbg)
2bh: SELENOMETHIONINE (MSEbh)
2bi: SELENOMETHIONINE (MSEbi)
2bj: SELENOMETHIONINE (MSEbj)
2bk: SELENOMETHIONINE (MSEbk)
2bl: SELENOMETHIONINE (MSEbl)
2bm: SELENOMETHIONINE (MSEbm)
2bn: SELENOMETHIONINE (MSEbn)
2bo: SELENOMETHIONINE (MSEbo)
2bp: SELENOMETHIONINE (MSEbp)
2bq: SELENOMETHIONINE (MSEbq)
2br: SELENOMETHIONINE (MSEbr)
2bs: SELENOMETHIONINE (MSEbs)
2bt: SELENOMETHIONINE (MSEbt)
2bu: SELENOMETHIONINE (MSEbu)
2bv: SELENOMETHIONINE (MSEbv)
2bw: SELENOMETHIONINE (MSEbw)
2bx: SELENOMETHIONINE (MSEbx)
2by: SELENOMETHIONINE (MSEby)
2bz: SELENOMETHIONINE (MSEbz)
2c: SELENOMETHIONINE (MSEc)
2ca: SELENOMETHIONINE (MSEca)
2cb: SELENOMETHIONINE (MSEcb)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
2s: SELENOMETHIONINE (MSEs)
2t: SELENOMETHIONINE (MSEt)
2u: SELENOMETHIONINE (MSEu)
2v: SELENOMETHIONINE (MSEv)
2w: SELENOMETHIONINE (MSEw)
2x: SELENOMETHIONINE (MSEx)
2y: SELENOMETHIONINE (MSEy)
2z: SELENOMETHIONINE (MSEz)
3a: PIPERAZINE-N,N'-BIS(2-ETHANESULFON... (PINa)
3b: PIPERAZINE-N,N'-BIS(2-ETHANESULFON... (PINb)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BME
16
Ligand/Ion
BETA-MERCAPTOETHANOL
2
MSE
80
Mod. Amino Acid
SELENOMETHIONINE
3
PIN
2
Ligand/Ion
PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID)
4
SO4
8
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:216 , TYR A:231 , HOH A:1081 , HOH A:1367
BINDING SITE FOR RESIDUE SO4 A 366
02
AC2
SOFTWARE
PRO B:189 , ARG B:216 , TYR B:231
BINDING SITE FOR RESIDUE SO4 B 366
03
AC3
SOFTWARE
ARG C:216 , TYR C:231 , HOH C:1547
BINDING SITE FOR RESIDUE SO4 C 366
04
AC4
SOFTWARE
PRO D:189 , ARG D:216 , TYR D:231 , HOH D:1082
BINDING SITE FOR RESIDUE SO4 D 461
05
AC5
SOFTWARE
ARG E:216 , TYR E:231 , HOH E:1083
BINDING SITE FOR RESIDUE SO4 E 561
06
AC6
SOFTWARE
PRO F:189 , ARG F:216 , TYR F:231 , HOH F:1084
BINDING SITE FOR RESIDUE SO4 F 661
07
AC7
SOFTWARE
ARG G:216 , TYR G:231 , HOH G:1283
BINDING SITE FOR RESIDUE SO4 G 761
08
AC8
SOFTWARE
PRO H:189 , ARG H:216 , TYR H:231
BINDING SITE FOR RESIDUE SO4 H 861
09
AC9
SOFTWARE
ARG A:349 , GLU B:279 , PRO B:305 , GLU B:331 , TRP B:333 , ARG B:349 , GLU C:35 , PRO C:37 , GLN C:38
BINDING SITE FOR RESIDUE PIN B 9012
10
BC1
SOFTWARE
ARG F:86 , PHE F:117 , ARG G:349 , PHE H:278 , GLU H:279 , PRO H:305 , GLU H:331 , TRP H:333 , ARG H:349
BINDING SITE FOR RESIDUE PIN H 9078
11
BC2
SOFTWARE
ARG A:290 , CYS A:292 , ALA E:176
BINDING SITE FOR RESIDUE BME A 367
12
BC3
SOFTWARE
HIS A:3 , CYS A:317 , TRP A:319 , TRP A:363
BINDING SITE FOR RESIDUE BME A 368
13
BC4
SOFTWARE
ARG B:290 , CYS B:292 , ALA F:176
BINDING SITE FOR RESIDUE BME B 9013
14
BC5
SOFTWARE
HIS B:3 , CYS B:317 , TRP B:319 , TRP B:363
BINDING SITE FOR RESIDUE BME B 9014
15
BC6
SOFTWARE
ARG C:290 , CYS C:292
BINDING SITE FOR RESIDUE BME C 367
16
BC7
SOFTWARE
HIS C:3 , CYS C:317 , TRP C:319 , TRP C:363
BINDING SITE FOR RESIDUE BME C 399
17
BC8
SOFTWARE
ARG D:290 , CYS D:292
BINDING SITE FOR RESIDUE BME D 466
18
BC9
SOFTWARE
HIS D:3 , CYS D:317 , TRP D:319 , TRP D:363
BINDING SITE FOR RESIDUE BME D 499
19
CC1
SOFTWARE
ARG E:290 , CYS E:292
BINDING SITE FOR RESIDUE BME E 566
20
CC2
SOFTWARE
HIS E:3 , CYS E:317 , TRP E:319 , TRP E:363
BINDING SITE FOR RESIDUE BME E 599
21
CC3
SOFTWARE
ALA B:176 , ARG F:290 , CYS F:292
BINDING SITE FOR RESIDUE BME F 666
22
CC4
SOFTWARE
HIS F:3 , CYS F:317 , TRP F:319 , TRP F:363
BINDING SITE FOR RESIDUE BME F 699
23
CC5
SOFTWARE
ARG G:290 , CYS G:292
BINDING SITE FOR RESIDUE BME G 766
24
CC6
SOFTWARE
HIS G:3 , CYS G:317 , TRP G:319 , TRP G:363
BINDING SITE FOR RESIDUE BME G 799
25
CC7
SOFTWARE
ARG H:290 , CYS H:292
BINDING SITE FOR RESIDUE BME H 1866
26
CC8
SOFTWARE
HIS H:3 , CYS H:317 , TRP H:319 , TRP H:363
BINDING SITE FOR RESIDUE BME H 1899
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1jofa_ (A:)
1b: SCOP_d1jofb_ (B:)
1c: SCOP_d1jofc_ (C:)
1d: SCOP_d1jofd_ (D:)
1e: SCOP_d1jofe_ (E:)
1f: SCOP_d1joff_ (F:)
1g: SCOP_d1jofg_ (G:)
1h: SCOP_d1jofh_ (H:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
3-carboxy-cis,cis-mucoante lactonizing enzyme
(1)
Family
:
3-carboxy-cis,cis-mucoante lactonizing enzyme
(1)
Protein domain
:
3-carboxy-cis,cis-mucoante lactonizing enzyme
(1)
Fungus (Neurospora crassa) [TaxId: 5141]
(1)
1a
d1jofa_
A:
1b
d1jofb_
B:
1c
d1jofc_
C:
1d
d1jofd_
D:
1e
d1jofe_
E:
1f
d1joff_
F:
1g
d1jofg_
G:
1h
d1jofh_
H:
[
close SCOP info
]
CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1jofA00 (A:1-365)
1b: CATH_1jofB00 (B:1-365)
1c: CATH_1jofC00 (C:1-365)
1d: CATH_1jofD00 (D:1-365)
1e: CATH_1jofE00 (E:1-365)
1f: CATH_1jofF00 (F:1-365)
1g: CATH_1jofG00 (G:1-365)
1h: CATH_1jofH00 (H:1-365)
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Classes
(
)
(
)
Architectures
(
)
(
)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
7 Propellor
(136)
Topology
:
Methylamine Dehydrogenase; Chain H
(136)
Homologous Superfamily
:
YVTN repeat-like/Quinoprotein amine dehydrogenase
(76)
Neurospora crassa. Organism_taxid: 5141.
(1)
1a
1jofA00
A:1-365
1b
1jofB00
B:1-365
1c
1jofC00
C:1-365
1d
1jofD00
D:1-365
1e
1jofE00
E:1-365
1f
1jofF00
F:1-365
1g
1jofG00
G:1-365
1h
1jofH00
H:1-365
[
close CATH info
]
Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_Lactonase_1jofH01 (H:4-305)
1b: PFAM_Lactonase_1jofH02 (H:4-305)
1c: PFAM_Lactonase_1jofH03 (H:4-305)
1d: PFAM_Lactonase_1jofH04 (H:4-305)
1e: PFAM_Lactonase_1jofH05 (H:4-305)
1f: PFAM_Lactonase_1jofH06 (H:4-305)
1g: PFAM_Lactonase_1jofH07 (H:4-305)
1h: PFAM_Lactonase_1jofH08 (H:4-305)
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Clans
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)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Beta_propeller
(192)
Family
:
Lactonase
(3)
Neurospora crassa
(1)
1a
Lactonase-1jofH01
H:4-305
1b
Lactonase-1jofH02
H:4-305
1c
Lactonase-1jofH03
H:4-305
1d
Lactonase-1jofH04
H:4-305
1e
Lactonase-1jofH05
H:4-305
1f
Lactonase-1jofH06
H:4-305
1g
Lactonase-1jofH07
H:4-305
1h
Lactonase-1jofH08
H:4-305
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