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1JK6
Asym. Unit
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Asym.Unit (29 KB)
Biol.Unit 1 (25 KB)
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(1)
Title
:
UNCOMPLEXED DES 1-6 BOVINE NEUROPHYSIN
Authors
:
J. P. Rose, B. -C. Wang
Date
:
11 Jul 01 (Deposition) - 29 Apr 03 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,C
Biol. Unit 1: A,C (1x)
Keywords
:
Neurophysin, Hormone Transport, Hypothalamus, Neuropeptide
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. K. Wu, B. Hu, J. P. Rose, Z. J. Liu, T. L. Nguyen, C. Zeng, E. Breslow, B. C. Wang
Structures Of An Unliganded Neurophysin And Its Vasopressin Complex: Implications For Binding And Allosteric Mechanisms
Protein Sci. V. 10 1869 2003
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(4, 8)
Info
All Exons
Exon 1.1 (A:7-9 | C:7-9)
Exon 1.2 (A:10-38 | C:10-38)
Exon 1.3 (A:39-77 | C:39-77)
Exon 1.4 (A:77-86 | C:77-86)
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1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000010555
1
ENSBTAE00000085807
chr13:
52661338-52661505
168
NEU2_BOVIN
1-40
40
2
A:7-9
C:7-9
3
3
1.2
ENSBTAT00000010555
2
ENSBTAE00000337556
chr13:
52662739-52662825
87
NEU2_BOVIN
41-69
29
2
A:10-38
C:10-38
29
29
1.3
ENSBTAT00000010555
3
ENSBTAE00000272221
chr13:
52662827-52662941
115
NEU2_BOVIN
70-108
39
2
A:39-77
C:39-77
39
39
1.4
ENSBTAT00000010555
4
ENSBTAE00000085809
chr13:
52663119-52663358
240
NEU2_BOVIN
108-166
59
2
A:77-86
C:77-86
10
10
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1jk6a_ (A:)
1b: SCOP_d1jk6c_ (C:)
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)
(
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Class
:
All beta proteins
(24004)
Fold
:
Neurophysin II
(11)
Superfamily
:
Neurophysin II
(11)
Family
:
Neurophysin II
(11)
Protein domain
:
Neurophysin II
(11)
Cow (Bos taurus) [TaxId: 9913]
(11)
1a
d1jk6a_
A:
1b
d1jk6c_
C:
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CATH Domains
(1, 2)
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1a: CATH_1jk6A00 (A:7-86)
1b: CATH_1jk6C00 (C:7-86)
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Neurophysin II; Chain A
(9)
Homologous Superfamily
:
Neurophysin II, chain A
(9)
Cattle (Bos taurus)
(9)
1a
1jk6A00
A:7-86
1b
1jk6C00
C:7-86
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Hormone_5_1jk6C01 (C:8-85)
1b: PFAM_Hormone_5_1jk6C02 (C:8-85)
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Clan
:
no clan defined [family: Hormone_5]
(2)
Family
:
Hormone_5
(2)
Bos taurus (Bovine)
(2)
1a
Hormone_5-1jk6C01
C:8-85
1b
Hormone_5-1jk6C02
C:8-85
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Asymmetric Unit 1
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