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1JJR
Asym. Unit
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Asym.Unit (297 KB)
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Models
(20 )
Title
:
THE THREE-DIMENSIONAL STRUCTURE OF THE C-TERMINAL DNA BINDING DOMAIN OF HUMAN KU70
Authors
:
Z. Zhang, Y. Chen
Date
:
09 Jul 01 (Deposition) - 03 Oct 01 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Dna Repair Protein, Protein-Dna Interaction, Ku70, Solution Structure, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Zhang, L. Zhu, D. Lin, F. Chen, D. J. Chen, Y. Chen
The Three-Dimensional Structure Of The C-Terminal Dna-Binding Domain Of Human Ku70.
J. Biol. Chem. V. 276 38231 2001
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SAP (A:61-95)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SAP
PS50800
SAP motif profile.
XRCC6_HUMAN
573-607
1
A:61-95
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Exons
(1, 1)
Info
All Exons
Exon 1.13c (A:44-97)
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All Exon Boundaries
1: Boundary 1.12a/1.13c
2: Boundary 1.13c/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000360079
1a
ENSE00001816656
chr22:
42017123-42017349
227
XRCC6_HUMAN
-
0
0
-
-
1.2e
ENST00000360079
2e
ENSE00002150395
chr22:
42017994-42018090
97
XRCC6_HUMAN
1-28
28
0
-
-
1.3a
ENST00000360079
3a
ENSE00000656031
chr22:
42024122-42024234
113
XRCC6_HUMAN
28-65
38
0
-
-
1.4a
ENST00000360079
4a
ENSE00000656042
chr22:
42032117-42032255
139
XRCC6_HUMAN
66-112
47
0
-
-
1.5
ENST00000360079
5
ENSE00000656049
chr22:
42032520-42032774
255
XRCC6_HUMAN
112-197
86
0
-
-
1.6
ENST00000360079
6
ENSE00000656053
chr22:
42033612-42033795
184
XRCC6_HUMAN
197-258
62
0
-
-
1.7
ENST00000360079
7
ENSE00000656057
chr22:
42042900-42043086
187
XRCC6_HUMAN
258-320
63
0
-
-
1.8
ENST00000360079
8
ENSE00000880476
chr22:
42046727-42046895
169
XRCC6_HUMAN
321-377
57
0
-
-
1.9
ENST00000360079
9
ENSE00000880477
chr22:
42049533-42049694
162
XRCC6_HUMAN
377-431
55
0
-
-
1.10a
ENST00000360079
10a
ENSE00000656076
chr22:
42052907-42053036
130
XRCC6_HUMAN
431-474
44
0
-
-
1.11
ENST00000360079
11
ENSE00000656085
chr22:
42054256-42054356
101
XRCC6_HUMAN
474-508
35
0
-
-
1.12a
ENST00000360079
12a
ENSE00000656094
chr22:
42057335-42057448
114
XRCC6_HUMAN
508-546
39
0
-
-
1.13c
ENST00000360079
13c
ENSE00001525046
chr22:
42059626-42060043
418
XRCC6_HUMAN
546-609
64
1
A:44-97
54
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d1jjra_ (A:)
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)
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
LEM/SAP HeH motif
(33)
Superfamily
:
SAP domain
(9)
Family
:
SAP domain
(9)
Protein domain
:
DNA binding C-terminal domain of ku70
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1jjra_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1jjrA00 (A:44-97)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1
(23)
Homologous Superfamily
:
[code=1.10.720.30, no name defined]
(5)
Human (Homo sapiens)
(3)
1a
1jjrA00
A:44-97
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Pfam Domains
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Chain A
Asymmetric Unit 1
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