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1JGR
Asym. Unit
Info
Asym.Unit (34 KB)
Biol.Unit 1 (28 KB)
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Title
:
CRYSTAL STRUCTURE ANALYSIS OF THE B-DNA DODECAMER CGCGAATTCGCG WITH THALLIUM IONS.
Authors
:
S. B. Howerton, C. C. Sines, D. Vanderveer, L. D. Williams
Date
:
26 Jun 01 (Deposition) - 05 Sep 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Double Helix, Deoxyribonucleic Acid, Thallium, Dna
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. B. Howerton, C. C. Sines, D. Vanderveer, L. D. Williams
Locating Monovalent Cations In The Grooves Of B-Dna.
Biochemistry V. 40 10023 2001
(for further references see the
PDB file header
)
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
2a: THALLIUM (I) ION (TLa)
2b: THALLIUM (I) ION (TLb)
2c: THALLIUM (I) ION (TLc)
2d: THALLIUM (I) ION (TLd)
2e: THALLIUM (I) ION (TLe)
2f: THALLIUM (I) ION (TLf)
2g: THALLIUM (I) ION (TLg)
2h: THALLIUM (I) ION (TLh)
2i: THALLIUM (I) ION (TLi)
2j: THALLIUM (I) ION (TLj)
2k: THALLIUM (I) ION (TLk)
2l: THALLIUM (I) ION (TLl)
2m: THALLIUM (I) ION (TLm)
View:
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Label:
No.
Name
Count
Type
Full Name
1
MG
1
Ligand/Ion
MAGNESIUM ION
2
TL
13
Ligand/Ion
THALLIUM (I) ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TL A:2108 , HOH A:3136 , HOH A:3137 , HOH A:3138 , HOH A:3139 , TL B:2107 , HOH B:3135 , HOH B:3140
BINDING SITE FOR RESIDUE MG A 2013
02
AC2
SOFTWARE
DC B:2003 , DG B:2004 , HOH B:3081 , HOH B:3082
BINDING SITE FOR RESIDUE TL B 2101
03
AC3
SOFTWARE
DG A:1010 , TL A:2110 , TL A:2113 , DG B:2002
BINDING SITE FOR RESIDUE TL B 2102
04
AC4
SOFTWARE
DG A:1004 , HOH A:3122 , HOH A:3123
BINDING SITE FOR RESIDUE TL A 2103
05
AC5
SOFTWARE
DA A:1005 , DA A:1006 , DC B:2009 , HOH B:3003
BINDING SITE FOR RESIDUE TL A 2104
06
AC6
SOFTWARE
DG A:1004 , DA A:1005 , DG A:1012 , HOH A:3120
BINDING SITE FOR RESIDUE TL A 2105
07
AC7
SOFTWARE
DT A:1007 , DT A:1008 , HOH A:3015 , DT B:2007 , DT B:2008 , HOH B:3024
BINDING SITE FOR RESIDUE TL B 2106
08
AC8
SOFTWARE
DG A:1002 , MG A:2013 , TL A:2108 , HOH A:3136 , DG B:2010 , HOH B:3135
BINDING SITE FOR RESIDUE TL B 2107
09
AC9
SOFTWARE
DC A:1001 , DG A:1002 , MG A:2013 , HOH A:3136 , HOH A:3139 , DG B:2010 , TL B:2107 , HOH B:3135
BINDING SITE FOR RESIDUE TL A 2108
10
BC1
SOFTWARE
DG A:1004 , DC B:2009 , DG B:2010 , HOH B:3003 , HOH B:3103
BINDING SITE FOR RESIDUE TL B 2109
11
BC2
SOFTWARE
DG A:1010 , TL A:2113 , HOH A:3115 , HOH A:3116 , TL B:2102
BINDING SITE FOR RESIDUE TL A 2110
12
BC3
SOFTWARE
DC A:1001 , HOH A:3013 , HOH A:3079 , DG B:2002 , DC B:2003
BINDING SITE FOR RESIDUE TL A 2111
13
BC4
SOFTWARE
DG A:1002 , DC A:1003 , DC B:2001 , HOH B:3124
BINDING SITE FOR RESIDUE TL B 2112
14
BC5
SOFTWARE
DG A:1010 , TL A:2110 , DG B:2002 , TL B:2102
BINDING SITE FOR RESIDUE TL A 2113
[
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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Asym.Unit (34 KB)
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