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Asym. Unit
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Asym.Unit (254 KB)
Biol.Unit 1 (249 KB)
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(1)
Title
:
X-RAY STRUCTURE OF NITRIC OXIDE REDUCTASE (CYTOCHROME P450NOR) IN THE FERRIC RESTING STATE AT ATOMIC RESOLUTION
Authors
:
H. Shimizu, S. Adachi, S. Y. Park, Y. Shiro, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
20 Jun 01 (Deposition) - 20 Dec 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Nitric Oxide Reductase, Cytochrome P450Nor, Atomic Resolution, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Shimizu, S. Y. Park, Y. Shiro, S. Adachi
X-Ray Structure Of Nitric Oxide Reductase (Cytochrome P450Nor) At Atomic Resolution.
Acta Crystallogr. , Sect. D V. 58 81 2002
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(2, 2)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE A:86 , VAL A:87 , HIS A:94 , ARG A:98 , ILE A:153 , LEU A:236 , ALA A:239 , GLY A:240 , THR A:243 , MET A:244 , MET A:247 , SER A:286 , GLY A:344 , PHE A:345 , GLY A:346 , PHE A:347 , HIS A:350 , CYS A:352 , ALA A:354 , HOH A:604 , HOH A:610 , HOH A:613 , HOH A:727 , HOH A:879
BINDING SITE FOR RESIDUE HEM A 501
2
AC2
SOFTWARE
ALA A:55 , MET A:89 , ASP A:90 , ARG A:292 , HIS A:350 , HOH A:607 , HOH A:654 , HOH A:670 , HOH A:856
BINDING SITE FOR RESIDUE GOL A 502
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PROSITE Patterns/Profiles
(1, 1)
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1: CYTOCHROME_P450 (A:345-354)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
NOR_FUSOX
345-354
1
A:345-354
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d1jfba_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
Cytochrome P450
(323)
Protein domain
:
Cytochrome P450-NOR, nitric reductase
(18)
Fungus (Fusarium oxysporum) [TaxId: 5507]
(18)
1a
d1jfba_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1jfbA00 (A:5-403)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Cytochrome p450
(271)
Homologous Superfamily
:
Cytochrome p450
(271)
Fusarium oxysporum. Organism_taxid: 5507.
(16)
1a
1jfbA00
A:5-403
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_p450_1jfbA01 (A:165-379)
1b: PFAM_p450_1jfbA02 (A:165-379)
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Clan
:
no clan defined [family: p450]
(161)
Family
:
p450
(161)
Fusarium oxysporum (Panama disease fungus)
(6)
1a
p450-1jfbA01
A:165-379
1b
p450-1jfbA02
A:165-379
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