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1JBJ
Asym. Unit
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Asym.Unit (866 KB)
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Models
(18 )
Title
:
CD3 EPSILON AND GAMMA ECTODOMAIN FRAGMENT COMPLEX IN SINGLE-CHAIN CONSTRUCT
Authors
:
Z. -Y. J. Sun, K. S. Kim, G. Wagner, E. L. Reinherz
Date
:
05 Jun 01 (Deposition) - 05 Dec 01 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (18 x)
Keywords
:
Beta-Sheet, C2-Set Immunoglobulin Superfamily, H-Bonded G Strand Pair, Single-Chain, Immune System
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. J. Sun, K. S. Kim, G. Wagner, E. L. Reinherz
Mechanisms Contributing To T Cell Receptor Signaling And Assembly Revealed By The Solution Structure Of An Ectodomain Fragment Of The Cd3 Epsilon Gamma Heterodimer.
Cell(Cambridge, Mass. ) V. 105 913 2001
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(4, 4)
Info
All Exons
Exon 1.1 (A:6-77)
Exon 1.2 (A:77-110)
Exon 1.3 (A:110-186)
Exon 1.4b (A:186-186)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4b
5: Boundary 1.4b/1.5
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSMUST00000002101
1
ENSMUSE00000256588
chr9:
44788514-44788349
166
CD3G_MOUSE
1-19
19
1
A:6-77
72
1.2
ENSMUST00000002101
2
ENSMUSE00000256571
chr9:
44783353-44783330
24
CD3G_MOUSE
19-27
9
1
A:77-110
34
1.3
ENSMUST00000002101
3
ENSMUSE00000256560
chr9:
44782473-44782246
228
CD3G_MOUSE
27-103
77
1
A:110-186
77
1.4b
ENSMUST00000002101
4b
ENSMUSE00000216424
chr9:
44781720-44781589
132
CD3G_MOUSE
103-147
45
1
A:186-186
1
1.5
ENSMUST00000002101
5
ENSMUSE00000216425
chr9:
44779389-44779346
44
CD3G_MOUSE
147-161
15
0
-
-
1.6c
ENSMUST00000002101
6c
ENSMUSE00000216423
chr9:
44778856-44778774
83
CD3G_MOUSE
162-182
21
0
-
-
1.8b
ENSMUST00000002101
8b
ENSMUSE00000856964
chr9:
44778000-44777655
346
CD3G_MOUSE
-
0
0
-
-
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1jbja2 (A:1-100)
2a: SCOP_d1jbja1 (A:101-186)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
I set domains
(152)
Protein domain
:
CD3 epsilon chain ectodomain fragment
(5)
Mouse (Mus musculus) [TaxId: 10090]
(2)
1a
d1jbja2
A:1-100
Protein domain
:
CD3 gamma chain ectodomain fragment
(2)
Mouse (Mus musculus) [TaxId: 10090]
(1)
2a
d1jbja1
A:101-186
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_1jbjA02 (A:112-186)
1b: CATH_1jbjA01 (A:1-89)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
House mouse (Mus musculus)
(616)
1a
1jbjA02
A:112-186
1b
1jbjA01
A:1-89
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Pfam Domains
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Chain A
Asymmetric Unit 1
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