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1JAZ
Biol. Unit 1
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Asym.Unit (101 KB)
Biol.Unit 1 (190 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MONOCLINIC FORM OF D90E MUTANT OF ESCHERICHIA COLI ASPARAGINASE II
Authors
:
D. Borek, M. Kozak, M. Jaskolski
Date
:
01 Jun 01 (Deposition) - 09 Sep 03 (Release) - 19 Oct 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.27
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
L-Asparaginase, Leukemia, Zinc-Binding Site, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Borek, M. Kozak, J. Pei, M. Jaskolski
Crystal Structure Of Active Site Mutant Of Antileukemic L-Asparaginase Reveals Conserved Zinc-Binding Site.
Febs J. V. 281 4097 2014
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:100 , HIS A:197 , HOH A:415 , HOH A:416
BINDING SITE FOR RESIDUE ZN A 401
2
AC2
SOFTWARE
ASP B:100 , HIS B:197 , HOH B:415 , HOH B:416
BINDING SITE FOR RESIDUE ZN B 402
3
AC3
SOFTWARE
ASP B:200
BINDING SITE FOR RESIDUE ZN B 403
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 12)
Info
All PROSITE Patterns/Profiles
1: ASN_GLN_ASE_3 (A:2-326,B:2-326)
2: ASN_GLN_ASE_1 (A:6-14,B:6-14)
3: ASN_GLN_ASE_2 (A:82-92,B:82-92)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ASN_GLN_ASE_3
PS51732
Asparaginase / glutaminase domain profile.
ASPG2_ECOLI
24-348
4
A:2-326
B:2-326
2
ASN_GLN_ASE_1
PS00144
Asparaginase / glutaminase active site signature 1.
ASPG2_ECOLI
28-36
4
A:6-14
B:6-14
3
ASN_GLN_ASE_2
PS00917
Asparaginase / glutaminase active site signature 2.
ASPG2_ECOLI
104-114
4
A:82-92
B:82-92
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d1jaza_ (A:)
1b: SCOP_d1jazb_ (B:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Glutaminase/Asparaginase
(37)
Superfamily
:
Glutaminase/Asparaginase
(37)
Family
:
Glutaminase/Asparaginase
(33)
Protein domain
:
Asparaginase type II
(17)
Escherichia coli [TaxId: 562]
(7)
1a
d1jaza_
A:
1b
d1jazb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1jazA01 (A:1-212)
1b: CATH_1jazB01 (B:1-212)
2a: CATH_1jazA02 (A:213-325)
2b: CATH_1jazB02 (B:213-325)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1170, no name defined]
(27)
Escherichia coli. Organism_taxid: 562.
(4)
1a
1jazA01
A:1-212
1b
1jazB01
B:1-212
Homologous Superfamily
:
[code=3.40.50.40, no name defined]
(27)
Escherichia coli. Organism_taxid: 562.
(4)
2a
1jazA02
A:213-325
2b
1jazB02
B:213-325
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Pfam Domains
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