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1J7N
Asym. Unit
Info
Asym.Unit (268 KB)
Biol.Unit 1 (262 KB)
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(1)
Title
:
ANTHRAX TOXIN LETHAL FACTOR
Authors
:
A. D. Pannifer, T. Y. Wong, R. Schwarzenbacher, M. Renatus, C. Petosa, R. J. Collier, J. Bienkowska, D. B. Lacy, S. Park, S. H. Leppla, P. Hanna R. C. Liddington
Date
:
17 May 01 (Deposition) - 07 Nov 01 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Anthrax, Lethal Toxin, Lethal Factor, Zinc Metalloprotease, Mapkk, Mek
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. D. Pannifer, T. Y. Wong, R. Schwarzenbacher, M. Renatus, C. Petosa, J. Bienkowska, D. B. Lacy, R. J. Collier, S. Park, S. H. Leppla, P. Hanna, R. C. Liddington
Crystal Structure Of The Anthrax Lethal Factor.
Nature V. 414 229 2001
(for further references see the
PDB file header
)
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SO4
2
Ligand/Ion
SULFATE ION
2
ZN
2
Ligand/Ion
ZINC ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:267 , ARG A:491 , HOH A:9019 , HOH A:9051 , HOH A:9076 , SER B:538 , HOH B:9289 , HOH B:9373
BINDING SITE FOR RESIDUE SO4 A 777
2
AC2
SOFTWARE
HOH A:9307 , ARG B:267 , TRP B:271 , ARG B:491 , HOH B:9103 , HOH B:9110 , HOH B:9359
BINDING SITE FOR RESIDUE SO4 B 777
3
AC3
SOFTWARE
HIS A:686 , HIS A:690 , TYR A:728 , GLU A:735 , HOH A:9437
BINDING SITE FOR RESIDUE ZN A 9001
4
AC4
SOFTWARE
HIS B:686 , HIS B:690 , TYR B:728 , GLU B:735 , HOH B:9258
BINDING SITE FOR RESIDUE ZN B 9002
[
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_LEF_BACAN_001 (S266S, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_LEF_BACAN_001
*
A
299
S
LEF_BACAN
---
---
A/B
S
266
S
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:683-692,B:683-692)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
LEF_BACAN
716-725
2
A:683-692
B:683-692
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d1j7na3 (A:264-550)
1b: SCOP_d1j7nb3 (B:264-550)
2a: SCOP_d1j7na1 (A:27-263)
2b: SCOP_d1j7na2 (A:551-773)
2c: SCOP_d1j7nb1 (B:27-263)
2d: SCOP_d1j7nb2 (B:551-776)
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)
(
)
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)
(
)
Superfamilies
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)
(
)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ADP-ribosylation
(157)
Superfamily
:
ADP-ribosylation
(157)
Family
:
ADP-ribosylating toxins
(85)
Protein domain
:
Anthrax toxin lethal factor, middle domain
(9)
Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
(9)
1a
d1j7na3
A:264-550
1b
d1j7nb3
B:264-550
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Anthrax toxin lethal factor, N- and C-terminal domains
(10)
Protein domain
:
Anthrax toxin lethal factor, N- and C-terminal domains
(9)
Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
(9)
2a
d1j7na1
A:27-263
2b
d1j7na2
A:551-773
2c
d1j7nb1
B:27-263
2d
d1j7nb2
B:551-776
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CATH Domains
(3, 8)
Info
all CATH domains
1a: CATH_1j7nB04 (B:552-772)
1b: CATH_1j7nA04 (A:552-773)
1c: CATH_1j7nA01 (A:27-248)
1d: CATH_1j7nB01 (B:27-248)
2a: CATH_1j7nA02 (A:263-297,A:385-550)
2b: CATH_1j7nB02 (B:263-297,B:385-550)
3a: CATH_1j7nB03 (B:303-382)
3b: CATH_1j7nA03 (A:303-382)
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)
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Collagenase (Catalytic Domain)
(236)
Homologous Superfamily
:
Collagenase (Catalytic Domain)
(234)
Bacillus anthracis. Organism_taxid: 1392.
(15)
1a
1j7nB04
B:552-772
1b
1j7nA04
A:552-773
1c
1j7nA01
A:27-248
1d
1j7nB01
B:27-248
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Toxin ADP-ribosyltransferase; Chain A, domain 1
(46)
Homologous Superfamily
:
Toxin ADP-ribosyltransferase; Chain A, domain 1
(46)
Bacillus anthracis. Organism_taxid: 1392.
(8)
2a
1j7nA02
A:263-297,A:385-550
2b
1j7nB02
B:263-297,B:385-550
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Anthrax toxin lethal factor, domain 3, chain A
(9)
Homologous Superfamily
:
Anthrax toxin lethal factor, domain 3, chain A
(9)
Bacillus anthracis. Organism_taxid: 1392.
(8)
3a
1j7nB03
B:303-382
3b
1j7nA03
A:303-382
[
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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Asym.Unit (268 KB)
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Header - Biol.Unit 1
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