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Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (151 KB)
Biol.Unit 2 (77 KB)
Biol.Unit 3 (77 KB)
Biol.Unit 4 (76 KB)
Biol.Unit 5 (299 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN TRANSLIN
Authors
:
I. Sugiura, C. Sasaki, T. Hasegawa, T. Kohno, S. Sugio, H. Moriyama, M. K T. Matsuzaki
Date
:
06 Dec 02 (Deposition) - 06 Dec 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: D (2x)
Biol. Unit 3: A,C (1x)
Biol. Unit 4: B (2x)
Biol. Unit 5: A,B,C,D (2x)
Keywords
:
Testis/Brain Rna Binding Protein, Ssdna Binding Protein, Rna Binding Protein, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
I. Sugiura, C. Sasaki, T. Hasegawa, T. Kohno, S. Sugio, H. Moriyama, M. Kasai, T. Matsuzaki
Structure Of Human Translin At 2. 2 A Resolution.
Acta Crystallogr. , Sect. D V. 60 674 2004
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(6, 24)
Info
All Exons
Exon 1.2a (A:1-22 | B:1-22 | C:1-22 | D:1-22)
Exon 1.4b (A:23-54 | B:23-54 | C:23-54 | D:23...)
Exon 1.5 (A:54-86 | B:54-86 | C:54-86 | D:54...)
Exon 1.6 (A:86-125 | B:86-125 | C:86-125 | D...)
Exon 1.7b (A:125-151 | B:125-151 | C:125-151 ...)
Exon 1.8h (A:152-217 | B:152-217 | C:152-217 ...)
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All Exon Boundaries
1: Boundary -/1.2a
2: Boundary 1.2a/1.4b
3: Boundary 1.4b/1.5
4: Boundary 1.5/1.6
5: Boundary 1.6/1.7b
6: Boundary 1.7b/1.8h
7: Boundary 1.8h/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000389682
2a
ENSE00001506653
chr2:
122513109-122513421
313
TSN_HUMAN
1-22
22
4
A:1-22
B:1-22
C:1-22
D:1-22
22
22
22
22
1.4b
ENST00000389682
4b
ENSE00001506652
chr2:
122514816-122514909
94
TSN_HUMAN
23-54
32
4
A:23-54
B:23-54
C:23-54
D:23-54
32
32
32
32
1.5
ENST00000389682
5
ENSE00001506651
chr2:
122516286-122516382
97
TSN_HUMAN
54-86
33
4
A:54-86
B:54-86
C:54-86
D:54-86
33
33
33
33
1.6
ENST00000389682
6
ENSE00001506650
chr2:
122518985-122519100
116
TSN_HUMAN
86-125
40
4
A:86-125
B:86-125
C:86-125
D:86-125
40
40
40
40
1.7b
ENST00000389682
7b
ENSE00001506649
chr2:
122520581-122520660
80
TSN_HUMAN
125-151
27
4
A:125-151
B:125-151
C:125-151
D:125-151
27
27
27
27
1.8h
ENST00000389682
8h
ENSE00001506648
chr2:
122522710-122525429
2720
TSN_HUMAN
152-228
77
4
A:152-217
B:152-217
C:152-217
D:152-217
66
66
66
66
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1j1ja_ (A:)
1b: SCOP_d1j1jb_ (B:)
1c: SCOP_d1j1jc_ (C:)
1d: SCOP_d1j1jd_ (D:)
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
Translin
(5)
Family
:
Translin
(4)
Protein domain
:
Translin
(2)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1j1ja_
A:
1b
d1j1jb_
B:
1c
d1j1jc_
C:
1d
d1j1jd_
D:
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_1j1jA01 (A:1-132)
1b: CATH_1j1jB01 (B:1-132)
1c: CATH_1j1jC01 (C:1-132)
1d: CATH_1j1jD01 (D:1-132)
2a: CATH_1j1jA02 (A:133-217)
2b: CATH_1j1jB02 (B:133-217)
2c: CATH_1j1jC02 (C:133-217)
2d: CATH_1j1jD02 (D:133-217)
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Organisms
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)
(
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Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Methane Monooxygenase Hydroxylase; Chain G, domain 1
(192)
Homologous Superfamily
:
Translin; domain 1
(2)
Human (Homo sapiens)
(1)
1a
1j1jA01
A:1-132
1b
1j1jB01
B:1-132
1c
1j1jC01
C:1-132
1d
1j1jD01
D:1-132
Homologous Superfamily
:
Translin; domain 2
(2)
Human (Homo sapiens)
(1)
2a
1j1jA02
A:133-217
2b
1j1jB02
B:133-217
2c
1j1jC02
C:133-217
2d
1j1jD02
D:133-217
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (156 KB)
Header - Asym.Unit
Biol.Unit 1 (151 KB)
Header - Biol.Unit 1
Biol.Unit 2 (77 KB)
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Biol.Unit 3 (77 KB)
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Biol.Unit 4 (76 KB)
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