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1IYX
Asym. Unit
Info
Asym.Unit (142 KB)
Biol.Unit 1 (137 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ENOLASE FROM ENTEROCOCCUS HIRAE
Authors
:
T. Hosaka, T. Meguro, I. Yamato, Y. Shirakihara
Date
:
12 Sep 02 (Deposition) - 29 Jul 03 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Enolase Family, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Hosaka, T. Meguro, I. Yamato, Y. Shirakihara
Crystal Structure Of Enterococcus Hirae Enolase At 2. 8 A Resolution
J. Biochem. (Tokyo) V. 133 817 2003
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
6
Ligand/Ion
GLYCEROL
2
MG
2
Ligand/Ion
MAGNESIUM ION
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:162 , ASP A:241 , GLU A:287 , LYS A:390
BINDING SITE FOR RESIDUE MG A 1432
02
AC2
SOFTWARE
ASP B:241 , GLU B:287 , ASP B:288 , ASP B:314 , HOH B:2084
BINDING SITE FOR RESIDUE MG B 1432
03
AC3
SOFTWARE
GLY B:39 , ALA B:40 , LYS B:339 , ARG B:368 , SER B:369
BINDING SITE FOR RESIDUE SO4 B 1001
04
AC4
SOFTWARE
LYS A:339 , ARG A:368 , SER A:369 , HOH A:2032 , HOH A:2087
BINDING SITE FOR RESIDUE SO4 A 1002
05
AC5
SOFTWARE
ASP A:411 , HOH A:2057 , TYR B:7
BINDING SITE FOR RESIDUE GOL A 2001
06
AC6
SOFTWARE
ASP A:5 , TYR A:7 , TYR A:25 , HOH A:2070
BINDING SITE FOR RESIDUE GOL A 2002
07
AC7
SOFTWARE
ALA A:77 , ILE A:79
BINDING SITE FOR RESIDUE GOL A 2003
08
AC8
SOFTWARE
ALA B:77 , ILE B:79 , TYR B:81
BINDING SITE FOR RESIDUE GOL B 2004
09
AC9
SOFTWARE
MET A:87 , GLU A:348 , GLU A:351
BINDING SITE FOR RESIDUE GOL A 2005
10
BC1
SOFTWARE
LEU A:125 , HIS A:131 , TYR A:132 , HOH A:2084 , LEU B:125 , HIS B:131 , GLY B:135 , HOH B:2083
BINDING SITE FOR RESIDUE GOL B 2006
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: ENOLASE (A:336-349,B:336-349)
;
View:
Select:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ENOLASE
PS00164
Enolase signature.
ENO_ENTHR
337-350
2
A:336-349
B:336-349
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1iyxa2 (A:1-136)
1b: SCOP_d1iyxb2 (B:1-136)
2a: SCOP_d1iyxa1 (A:137-431)
2b: SCOP_d1iyxb1 (B:137-431)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Enolase N-terminal domain-like
(211)
Superfamily
:
Enolase N-terminal domain-like
(211)
Family
:
Enolase N-terminal domain-like
(88)
Protein domain
:
Enolase
(39)
Enterococcus hirae [TaxId: 1354]
(1)
1a
d1iyxa2
A:1-136
1b
d1iyxb2
B:1-136
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Enolase C-terminal domain-like
(212)
Family
:
Enolase
(45)
Protein domain
:
Enolase
(39)
Enterococcus hirae [TaxId: 1354]
(1)
2a
d1iyxa1
A:137-431
2b
d1iyxb1
B:137-431
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1iyxA01 (A:2-126)
1b: CATH_1iyxB01 (B:2-126)
2a: CATH_1iyxA02 (A:127-430)
2b: CATH_1iyxB02 (B:127-430)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
Enolase-like, N-terminal domain
(130)
Enterococcus hirae. Organism_taxid: 1354
(1)
1a
1iyxA01
A:2-126
1b
1iyxB01
B:2-126
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Enolase superfamily
(142)
Enterococcus hirae. Organism_taxid: 1354
(1)
2a
1iyxA02
A:127-430
2b
1iyxB02
B:127-430
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Pfam Domains
(0, 0)
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all PFAM domains
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Asymmetric Unit 1
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