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1IYJ
Biol. Unit 2
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Asym.Unit (205 KB)
Biol.Unit 1 (100 KB)
Biol.Unit 2 (99 KB)
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(1)
Title
:
STRUCTURE OF A BRCA2-DSS1 COMPLEX
Authors
:
N. P. Pavletich, P. D. Jeffrey, H. J. Yang
Date
:
28 Aug 02 (Deposition) - 02 Oct 02 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Tumor Suppressor, Breast Cancer Susceptibility, Dna-Binding, Gene Regulation/Antitumor Protein Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Yang, P. D. Jeffrey, J. Miller, E. Kinnucan, Y. Sun, N. H. Thoma, N. Zheng, P. L. Chen, W. H. Lee, N. P. Pavletich
Brca2 Function In Dna Binding And Recombination From A Brca2-Dss1-Ssdna Structure.
Science V. 297 1837 2002
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_012003 (D17G, chain C, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_012003
D
17
G
DSS1_HUMAN
Polymorphism
1802882
C
D
17
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 10)
Info
All SCOP Domains
1a: SCOP_d1iyjb1 (B:2403-2598)
1b: SCOP_d1iyjd1 (D:2403-2598)
2a: SCOP_d1iyjb2 (B:2761-2897)
2b: SCOP_d1iyjd2 (D:2761-2897)
3a: SCOP_d1iyjb3 (B:2599-2731)
3b: SCOP_d1iyjb4 (B:2732-2760,B:2898-2979)
3c: SCOP_d1iyjb5 (B:2980-3117)
3d: SCOP_d1iyjd3 (D:2599-2731)
3e: SCOP_d1iyjd4 (D:2732-2760,D:2898-2979)
3f: SCOP_d1iyjd5 (D:2980-3117)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
BRCA2 helical domain
(3)
Superfamily
:
BRCA2 helical domain
(3)
Family
:
BRCA2 helical domain
(3)
Protein domain
:
BRCA2 helical domain
(3)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(1)
1a
d1iyjb1
B:2403-2598
1b
d1iyjd1
D:2403-2598
Fold
:
BRCA2 tower domain
(3)
Superfamily
:
BRCA2 tower domain
(3)
Family
:
BRCA2 tower domain
(3)
Protein domain
:
BRCA2 tower domain
(3)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(1)
2a
d1iyjb2
B:2761-2897
2b
d1iyjd2
D:2761-2897
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
Nucleic acid-binding proteins
(590)
Family
:
Single strand DNA-binding domain, SSB
(96)
Protein domain
:
OB-fold domains of BRCA2
(3)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(1)
3a
d1iyjb3
B:2599-2731
3b
d1iyjb4
B:2732-2760,B:2898-2979
3c
d1iyjb5
B:2980-3117
3d
d1iyjd3
D:2599-2731
3e
d1iyjd4
D:2732-2760,D:2898-2979
3f
d1iyjd5
D:2980-3117
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1iyjB02 (B:2599-2729)
1b: CATH_1iyjD02 (D:2599-2729)
1c: CATH_1iyjB03 (B:2730-2892,B:2894-2979)
1d: CATH_1iyjD03 (D:2730-2892,D:2894-2979)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
OB fold (Dihydrolipoamide Acetyltransferase, E2P)
(1040)
Homologous Superfamily
:
Nucleic acid-binding proteins
(483)
Human (Homo sapiens)
(27)
1a
1iyjB02
B:2599-2729
1b
1iyjD02
D:2599-2729
1c
1iyjB03
B:2730-2892,B:2894-2979
1d
1iyjD03
D:2730-2892,D:2894-2979
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Pfam Domains
(0, 0)
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Chain C
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (205 KB)
Header - Asym.Unit
Biol.Unit 1 (100 KB)
Header - Biol.Unit 1
Biol.Unit 2 (99 KB)
Header - Biol.Unit 2
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