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1ITB
Asym. Unit
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Asym.Unit (97 KB)
Biol.Unit 1 (92 KB)
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(1)
Title
:
TYPE-1 INTERLEUKIN-1 RECEPTOR COMPLEXED WITH INTERLEUKIN-1 BETA
Authors
:
G. P. A. Vigers, L. J. Anderson, P. Caffes, B. J. Brandhuber
Date
:
15 Jan 97 (Deposition) - 04 Feb 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Immunoglobulin Fold, Transmembrane, Glycoprotein, Receptor, Signal, Complex (Immunoglobulin/Receptor)
(Keyword Search:
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)
Reference
:
G. P. Vigers, L. J. Anderson, P. Caffes, B. J. Brandhuber
Crystal Structure Of The Type-I Interleukin-1 Receptor Complexed With Interleukin-1Beta.
Nature V. 386 190 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_019131 (A107G, chain B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_019131
A
124
G
IL1R1_HUMAN
Polymorphism
2228139
B
A
107
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: INTERLEUKIN_1 (A:112-132)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INTERLEUKIN_1
PS00253
Interleukin-1 signature.
IL1B_HUMAN
228-248
1
A:112-132
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Exons
(3, 3)
Info
All Exons
Exon 1.4d (A:1-40)
Exon 1.5a (A:40-83)
Exon 1.6b (A:84-153)
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All Exon Boundaries
1: Boundary 1.3a/1.4d
2: Boundary 1.4d/1.5a
3: Boundary 1.5a/1.6b
4: Boundary 1.6b/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000263341
1a
ENSE00001951605
chr2:
113594480-113594285
196
IL1B_HUMAN
-
0
0
-
-
1.1g
ENST00000263341
1g
ENSE00002159273
chr2:
113593821-113593760
62
IL1B_HUMAN
1-16
16
0
-
-
1.2a
ENST00000263341
2a
ENSE00000856839
chr2:
113593194-113593143
52
IL1B_HUMAN
16-33
18
0
-
-
1.3a
ENST00000263341
3a
ENSE00000856838
chr2:
113591152-113590951
202
IL1B_HUMAN
34-101
68
0
-
-
1.4d
ENST00000263341
4d
ENSE00000856837
chr2:
113590403-113590239
165
IL1B_HUMAN
101-156
56
1
A:1-40
40
1.5a
ENST00000263341
5a
ENSE00000856836
chr2:
113588999-113588869
131
IL1B_HUMAN
156-199
44
1
A:40-83
44
1.6b
ENST00000263341
6b
ENSE00000856835
chr2:
113588150-113587328
823
IL1B_HUMAN
200-269
70
1
A:84-153
70
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1itba_ (A:)
2a: SCOP_d1itbb1 (B:6-101)
2b: SCOP_d1itbb2 (B:102-204)
2c: SCOP_d1itbb3 (B:205-315)
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Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Cytokine
(169)
Family
:
Interleukin-1 (IL-1)
(44)
Protein domain
:
Interleukin-1beta
(26)
Human (Homo sapiens) [TaxId: 9606]
(24)
1a
d1itba_
A:
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
I set domains
(152)
Protein domain
:
Type-1 interleukin-1 receptor
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
2a
d1itbb1
B:6-101
2b
d1itbb2
B:102-204
2c
d1itbb3
B:205-315
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1itbB02 (B:98-203)
1b: CATH_1itbB03 (B:204-315)
1c: CATH_1itbB01 (B:6-97)
2a: CATH_1itbA00 (A:1-153)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Human (Homo sapiens)
(912)
1a
1itbB02
B:98-203
1b
1itbB03
B:204-315
1c
1itbB01
B:6-97
Architecture
:
Trefoil
(289)
Topology
:
Trefoil (Acidic Fibroblast Growth Factor, subunit A)
(289)
Homologous Superfamily
:
[code=2.80.10.50, no name defined]
(289)
Human (Homo sapiens)
(131)
2a
1itbA00
A:1-153
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (97 KB)
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