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Getting 'Hetero Component' information from database.
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Getting 'Exon' information from database.
1IQ3
Asym. Unit
Info
Asym.Unit (526 KB)
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Models
(18 )
Title
:
SOLUTION STRUCTURE OF THE EPS15 HOMOLOGY DOMAIN OF A HUMAN POB1
Authors
:
S. Koshiba, T. Kigawa, J. Iwahara, A. Kikuchi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
06 Jun 01 (Deposition) - 27 Jun 01 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (18 x)
Keywords
:
Ef-Hand Domain, Pob1 Eh Domain, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Endocytosis/Exocytosis Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Koshiba, T. Kigawa, J. Iwahara, A. Kikuchi, S. Yokoyama
Solution Structure Of The Eps15 Homology Domain Of A Human Pob1 (Partner Of Ralbp1).
Febs Lett. V. 442 138 1999
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
[
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:66 , ALA A:67 , ASP A:68 , ASP A:70 , ALA A:72 , LEU A:73 , GLU A:77
BINDING SITE FOR RESIDUE CA A 111
[
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_069419 (S59C, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_069419
S
321
C
REPS2_HUMAN
Polymorphism
---
A
S
59
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: EH (-|A:20-105)
2: EF_HAND_2 (A:53-88)
3: EF_HAND_1 (A:66-78)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EH
PS50031
EH domain profile.
REPS2_HUMAN
34-135
282-367
1
-
A:20-105
2
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
REPS2_HUMAN
315-350
1
A:53-88
3
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
REPS2_HUMAN
328-340
1
A:66-78
[
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Exons
(5, 5)
Info
All Exons
Exon 1.5 (A:1-2)
Exon 1.6 (A:3-41)
Exon 1.7 (A:41-62)
Exon 1.8 (A:62-110)
Exon 1.9 (A:110-110)
View:
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All Exon Boundaries
1: Boundary 1.4a/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/1.8
5: Boundary 1.8/1.9
6: Boundary 1.9/1.10
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000357277
1a
ENSE00002147402
X:16964814-16965257
444
REPS2_HUMAN
1-91
91
0
-
-
1.2
ENST00000357277
2
ENSE00001656115
X:17024344-17024467
124
REPS2_HUMAN
92-133
42
0
-
-
1.3a
ENST00000357277
3a
ENSE00001681721
X:17040246-17040394
149
REPS2_HUMAN
133-182
50
0
-
-
1.4a
ENST00000357277
4a
ENSE00001150575
X:17043182-17043308
127
REPS2_HUMAN
183-225
43
0
-
-
1.5
ENST00000357277
5
ENSE00001150568
X:17047649-17047746
98
REPS2_HUMAN
225-257
33
1
A:1-2
2
1.6
ENST00000357277
6
ENSE00001150561
X:17065470-17065605
136
REPS2_HUMAN
258-303
46
1
A:3-41
39
1.7
ENST00000357277
7
ENSE00001150553
X:17070505-17070568
64
REPS2_HUMAN
303-324
22
1
A:41-62
22
1.8
ENST00000357277
8
ENSE00001150546
X:17072931-17073073
143
REPS2_HUMAN
324-372
49
1
A:62-110
49
1.9
ENST00000357277
9
ENSE00001150542
X:17080561-17080655
95
REPS2_HUMAN
372-403
32
1
A:110-110
1
1.10
ENST00000357277
10
ENSE00001150535
X:17086525-17086594
70
REPS2_HUMAN
404-427
24
0
-
-
1.11
ENST00000357277
11
ENSE00001150530
X:17088063-17088116
54
REPS2_HUMAN
427-445
19
0
-
-
1.12
ENST00000357277
12
ENSE00001201572
X:17092237-17092282
46
REPS2_HUMAN
445-460
16
0
-
-
1.14
ENST00000357277
14
ENSE00001201564
X:17095394-17095530
137
REPS2_HUMAN
460-506
47
0
-
-
1.15
ENST00000357277
15
ENSE00001201555
X:17121841-17121902
62
REPS2_HUMAN
506-526
21
0
-
-
1.16
ENST00000357277
16
ENSE00001201546
X:17151947-17152030
84
REPS2_HUMAN
527-554
28
0
-
-
1.17b
ENST00000357277
17b
ENSE00001150508
X:17153384-17153529
146
REPS2_HUMAN
555-603
49
0
-
-
1.18b
ENST00000357277
18b
ENSE00001201532
X:17156979-17157084
106
REPS2_HUMAN
603-638
36
0
-
-
1.19c
ENST00000357277
19c
ENSE00001898035
X:17165536-17171395
5860
REPS2_HUMAN
639-660
22
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1iq3a_ (A:)
View:
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Classes
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Folds
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Superfamilies
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)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Eps15 homology domain (EH domain)
(8)
Protein domain
:
Pob1
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1iq3a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1iq3A00 (A:1-110)
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Topologies
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Human (Homo sapiens)
(106)
1a
1iq3A00
A:1-110
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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