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1IKP
Asym. Unit
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Asym.Unit (111 KB)
Biol.Unit 1 (106 KB)
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(1)
Title
:
PSEUDOMONAS AERUGINOSA EXOTOXIN A, P201Q, W281A MUTANT
Authors
:
D. B. Mckay, J. E. Wedekind, C. B. Trame
Date
:
04 May 01 (Deposition) - 12 Dec 01 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
All 3 Exotoxin A Domains, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. E. Wedekind, C. B. Trame, M. Dorywalska, P. Koehl, T. M. Raschke, M. Mckee, D. Fitzgerald, R. J. Collier, D. B. Mckay
Refined Crystallographic Structure Of Pseudomonas Aeruginos Exotoxin A And Its Implications For The Molecular Mechanism Of Toxicity
J. Mol. Biol. V. 314 823 2001
(for further references see the
PDB file header
)
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: SODIUM ION (NAa)
2b: SODIUM ION (NAb)
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No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
NA
2
Ligand/Ion
SODIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:154 , ARG A:505
BINDING SITE FOR RESIDUE CL A 701
2
AC2
SOFTWARE
ASP A:589 , LYS A:590
BINDING SITE FOR RESIDUE CL A 702
3
AC3
SOFTWARE
ASN A:62 , LEU A:597 , HOH A:719 , HOH A:874 , HOH A:1039
BINDING SITE FOR RESIDUE NA A 703
4
AC4
SOFTWARE
ASP A:54 , ASP A:69 , HOH A:1074 , HOH A:1105 , HOH A:1214
BINDING SITE FOR RESIDUE NA A 704
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d1ikpa1 (A:2-251)
2a: SCOP_d1ikpa2 (A:395-606)
3a: SCOP_d1ikpa3 (A:252-394)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Exotoxin A, N-terminal domain
(2)
Protein domain
:
Exotoxin A, N-terminal domain
(2)
Pseudomonas aeruginosa [TaxId: 287]
(2)
1a
d1ikpa1
A:2-251
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ADP-ribosylation
(157)
Superfamily
:
ADP-ribosylation
(157)
Family
:
ADP-ribosylating toxins
(85)
Protein domain
:
Exotoxin A, C-terminal domain
(9)
Pseudomonas aeruginosa [TaxId: 287]
(9)
2a
d1ikpa2
A:395-606
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Toxins' membrane translocation domains
(135)
Superfamily
:
Exotoxin A, middle domain
(2)
Family
:
Exotoxin A, middle domain
(2)
Protein domain
:
Exotoxin A, middle domain
(2)
Pseudomonas aeruginosa [TaxId: 287]
(2)
3a
d1ikpa3
A:252-394
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CATH Domains
(3, 3)
Info
all CATH domains
1a: CATH_1ikpA03 (A:399-605)
2a: CATH_1ikpA02 (A:241-398)
3a: CATH_1ikpA01 (A:2-230)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Diphtheria Toxin; domain 1
(22)
Homologous Superfamily
:
Diphtheria Toxin, domain 1
(22)
Pseudomonas aeruginosa. Organism_taxid: 287.
(2)
1a
1ikpA03
A:399-605
Topology
:
Exotoxin A, middle domain
(2)
Homologous Superfamily
:
Exotoxin A, middle domain
(2)
Pseudomonas aeruginosa. Organism_taxid: 287.
(2)
2a
1ikpA02
A:241-398
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Pseudomonas aeruginosa. Organism_taxid: 287.
(2)
3a
1ikpA01
A:2-230
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Pfam Domains
(0, 0)
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all PFAM domains
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Atom Selection
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Protein
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All Atoms
Protein & NOT Variant
Protein & NOT Site
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Chain A
Asymmetric Unit 1
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Asym.Unit (111 KB)
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